Callorhinchus milii (elephant shark): 103180878
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Entry
103180878 CDS
T03088
Symbol
prdm8b
Name
(RefSeq) PR domain zinc finger protein 8b isoform X1
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103180878 (prdm8b)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103180878 (prdm8b)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103180878 (prdm8b)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103180878 (prdm8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
DUF1835
zf-C2H2_6
zf-Di19
zf-C2H2_9
DUF5810
Motif
Other DBs
NCBI-GeneID:
103180878
NCBI-ProteinID:
XP_007895158
UniProt:
A0A4W3HIB1
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All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDQGQGWDMDDSSIHKGIWESDASKAVQQCLTDIFTSVYTTCDIPEHAIFGPCILSHTSL
YDSIAFIALKSTDKRTVPYIFRVDTSAANSNSEGLMWLRLVQSARDKEEQNLEAYVKNGQ
LLYRSLRRIDKDEELLVWYGKELSELLLLSNIRAQAKMNGASPYTCLDCSQRFQCEYPFL
AHLRFRCQKRPSCCASDENVKSGGGRDHLVAVGPGPKFSRAERHSQENKPTTDFHNLARD
MEHLHEQPRDGREAESVSLSGGGGGSRRKYDQAEGRNDAATLRPPKTVDRSLTTIRENLV
RSPQQFRGGYFNLRENGRSMSSSSPDTTESKSSAFVEVKRTSLNLKQTPKDHVSDLTGKN
DMAPNTSSSEKTVGIKSILTETQVHSCLDNIAMRSAFTSVSQVCGTEERKSAFSQPSRSL
AQLSPLMVSQKVIPGLDCHSGIGDSGRLYQADALAAKLQQSSDVNGNCTMQSGLAKQSPF
VYATAFWPKASGPIQLQVPSALTLLPPSFTSFCLPAQNWCAKCNASFRMTSDLVYHMRSH
HKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSHN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatcagggacaaggctgggacatggatgattcaagtatccacaaaggaatttgggag
agcgatgccagcaaagccgtccagcagtgtctaactgatattttcacaagcgtttataca
acctgtgatattcccgaacatgccatttttggaccctgtatactgagccacacgtccttg
tacgacagcatcgctttcatcgcacttaaatcaaccgacaagaggacggttccctatatt
tttagggtcgatacttcggcagcgaacagcaactccgagggtttaatgtggctccgactg
gtccagtcggccagagataaagaggagcaaaacctggaggcctacgtgaaaaacgggcag
ttgctttatcggtctctgagacggattgacaaggacgaagagttactggtgtggtatgga
aaagaactgtcagagctgctcctactcagcaacatcagggcacaggccaagatgaacggg
gcatcgccgtacacgtgtctggactgcagtcagcgatttcagtgcgagtacccctttctc
gcccatctgcggttccgctgtcagaagcggccgagctgctgcgcctcggacgagaacgtc
aagagcggtggcggccgcgaccacctcgttgcggtgggacccggtcccaagttcagccgc
gccgagcggcactcccaggagaacaagcccaccacggacttccacaacctcgccagagat
atggagcacctgcacgaacagcccagggacggtcgggaggccgaaagcgtgagcctgagc
ggcggcggcggcggcagtaggagaaaatacgaccaggcggaaggaagaaacgacgccgcg
acgctgcgccctccgaagacggtcgacaggtcattgactacaatcagggaaaacttggtc
cgctccccccaacagttcagaggggggtatttcaatctcagagaaaatgggaggtcgatg
tcatcgtccagtccagacacgactgaatccaaatctagcgccttcgtcgaggtgaaaaga
acttctctcaatcttaagcagactccaaaggatcacgtttctgacctaaccggcaagaac
gacatggcacccaataccagctcttccgagaagacggtgggcatcaagtccattctgacc
gaaacgcaggtccactcttgtctggacaacatcgccatgaggagtgcgtttacgagtgtt
tctcaggtgtgcggaaccgaggagaggaagagtgcgttctcacagccatccagatcgctt
gcccagctctctccgctcatggtgtcccaaaaagttatccctggcctggactgtcactct
ggcatcggtgattctggcagactctaccaggcagatgccttggcggccaagctccaacag
agttcagatgtgaacggcaattgcactatgcaaagcggtctggccaagcaaagccctttc
gtctacgccaccgctttttggcccaaagcttctggacccatccagctgcaagtcccctcc
gcactcaccctactccctccttcgttcacgtccttttgtttaccagcgcagaactggtgc
gctaaatgcaacgcttctttcaggatgacatccgatttggtgtaccacatgagatcgcac
cacaaaaaggaatatgccatggagcctctggtgaagagacggagagaggagaaacttaag
tgtccaatttgcaatgaatcgtttagggaacgccaccacctttccaggcacatgacatct
cataattga
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