Callorhinchus milii (elephant shark): 103188371
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Entry
103188371 CDS
T03088
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103188371 (chd2)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103188371 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
DUF1388
nSTAND3
Motif
Other DBs
NCBI-GeneID:
103188371
NCBI-ProteinID:
XP_042199021
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MMSNEDKPPEEDGSDRSNVSSNSASEDSVHSASGSESGSQSESEQGSESNNSTSGSSESQ
SESGSDSAGCKSQQPTAESKDKRLSKKERIADVKKMWEEYPDVYGVRRSHRSRTAPTSSS
ATAEQGNSEISEGEGLKQRGRRRAKNWKQTVFEDYDEEEDEDEEETSSPATKSVRARRPA
TRRWQVKSKGKRQKPPRGKRRHHSSEEDDEDEDEDDDTPKRQTRQCVTKNVSYKEDDDFE
TDSDDLIEVTGEPSLEENDDSETIEKVIESRTGKKGGNLVVCWWLCTGLRLKGLVLLAIC
LFAAIGAPTTVYAMEAHENPEPVFDPQKDEQEIQYLIKWKGWSYIHNTWESEESLRQQKV
KGLKKLENFIKKEDDIKQWVANASPEDREYYNCQQELSLDLNKQYQIVERVIAMKTSKSA
SSHSDFPSHSSHKPPASGQPDYLCKWMGLPYVDCSWEDGALISRKFQMCIDAFHSRHSSK
SIPTRDCKVLKQRPRFVAMKKQPTYIGSEGLELRDYQLEGLNWLAHSWCKNNSVILADEM
GLGKTIQTISFLSYLFHQHQLYGPFLVVVPLSTLTSWQREFDIWEPNMNVVVYIGDVMSR
NTIREYDWTHPQTKRLKFNVLITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYR
TLIDFRSNNRLLITGTPLQNSLKELWSLLHFIMPERFDSWEDFEEEHGKGRENGYQSLHR
VLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYKALSRGVRGTSSSF
LNIMMELKKCCNHCYLVKPPEDSEHHSWQEELQNLIKSSGKLILLDKLMTRLRERGNRVL
IFSQMVRMLDILAEYLSIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGG
LGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQRKQVNIYRLVTKGTVEEDIIERAKK
KMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNREELSAILKFGAEELFKEPEGEESEPQ
EMDIEEILRLAETRENEGSVSPTDELLSQFKVANFSTMEEAEPETEVGNQKEWDDIIPEE
QRRKIEEAERQKELEEIYMLPRSRSSTKKARVNGSDSDVGSRRRRQQSSGSDSETDESDD
EDKRPKRRGRPRTVRRDMVDGFTDSEIRRFIKSYKKFGTPLERLEAIARDAELVEKSIAD
LKRLGELIHNGCVLALKEYEEQLKETPGMEGKGPGKKRGPTIKVSGVQVNVKSILIHEEE
FEVLHKALPSEPEDRKKYRFPCHTKAAHFDTDWGVEEDSSLLLGIYDCGYGNWEQIKMDP
ALQLTGKILPSDPDLKPQGKQLQSRADYLIKLLKKDMVKKEALNHEAEPKPRKRKQRVKK
ENKAPRLRDEGGTDMASPRLSDNPSEEGELKDGALDRTPVKKKLKTKDNKENKDKSQLKK
EKDRQKEKKKSREKRAKARSEGKDKSCKSVTKGPVHITAGSDPVPIGEEGEDELDQETFG
ICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITECLLAYTDSEETKHWR
RNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQRKKESSAGSRKLFRPETSGSSHDS
INSQPHGPPSLYPPLPHHLPQLPPGHHRGSYTQLHNRPFNNTDRGERPRERMYNYGGGGG
GPWGPDRHHVYEQHRYKEHHYGDRRPRSDPHRNSGNYRLNNIHRKRPYSPYSNDRERRGH
REYYDRRHQDGKRRRSDEFRPQDHHNPCHQTDPRRPPDHRPPGPYHSQGPSEHYRSFHPD
RPAEHRSPLAQKSPHDSKSPLEHSLEHKGTPDYSWSTRKT
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccaacgaggataaaccccccgaagaagacggctccgatcgcagcaatgtttcc
agtaactctgcttctgaggactctgttcattcggcatcggggtcagagtctggcagccag
tcagagagcgagcagggaagcgaatccaacaacagcacttctggatcctcagaatcccag
tcggaatctggaagtgactcggcaggatgcaagtcgcagcagcccaccgccgagagcaag
gacaaacgtctcagcaagaaggagaggattgccgacgtgaaaaagatgtgggaagaatat
cctgatgtttatggggttaggagatcacaccgcagcagaactgcccccaccagctccagt
gccacagctgagcagggcaacagcgagatatccgagggtgaaggcctgaagcaaagaggg
aggaggagagctaaaaactggaaacaaaccgtctttgaagattatgatgaagaggaggac
gaagatgaggaggaaacgagcagccctgcaaccaagagtgttcgagcccgacgacctgcc
accagaagatggcaagtcaaaagcaaaggcaaaaggcagaaacctccaagaggaaagagg
aggcaccattcttccgaggaggatgacgaggatgaggatgaagatgacgacacccccaaa
cgccaaacccgccaatgcgtgaccaaaaacgtgagttacaaagaagatgatgattttgag
actgactcagatgatctaatcgaagttacaggagagccgtccctggaagagaacgacgac
agtgagaccatcgagaaggtgatagagtcccggactgggaaaaaaggaggtaatcttgtt
gtgtgctggtggttgtgcacaggtttaaggctgaagggtttggtcttattggcgatttgt
ttattcgcagccattggggcacccaccacagtgtatgcgatggaggcgcatgagaacccg
gagcctgtattcgatccccagaaggacgagcaggagatccagtatctgatcaagtggaaa
ggctggtcatacatccacaacacctgggagagcgaggagtccctcaggcagcaaaaagtc
aaaggactgaaaaaactggagaatttcatcaaaaaagaggatgatataaaacaatgggtg
gccaatgcatccccagaggaccgcgagtattataactgtcagcaggaattgtctctggac
ctgaacaaacaataccagattgtggagagagtcatcgcaatgaaaaccagcaaatcagct
tccagtcactcagacttcccctcacattccagccacaaacccccagcctctggccaacct
gactacctgtgtaaatggatgggactcccctacgtggactgcagctgggaggatggggcc
cttatttccaggaagttccagatgtgcattgatgccttccacagccggcacagctccaag
agcattcccaccagagactgcaaggtgctgaagcaaaggcctcggtttgtagcgatgaag
aagcagccaacatacattggcagcgaagggttggagctgcgagattaccagctcgagggg
ctgaactggctcgctcactcctggtgcaagaataacagcgtgatcctggccgatgagatg
ggtttggggaagaccatccagaccatctccttcctatcgtacctgttccaccagcatcag
ctgtacggccccttcctagtggtggtgcctctctccaccctcacctcctggcaacgcgag
tttgacatctgggaacccaacatgaatgtggtggtgtacatcggcgatgtcatgagccgc
aacacgattcgggagtacgactggacccaccctcagacaaagaggctgaagtttaacgtg
ttaataactacctatgaaatcctgctgaaagataagacggttttgggaagtataaactgg
gctttcctgggagtggatgaggctcatcggctgaagaacgatgactcgctcttataccgg
accctgatagatttccgatccaacaaccggctgctgatcactggcacccccctgcagaat
tcgctgaaggaactctggtctctgctgcactttatcatgcccgaaaggtttgactcctgg
gaggattttgaagaggagcacgggaaggggcgtgagaacggataccagagccttcacagg
gtgctggagcccttcctgctgcgcagggtcaagaaagacgtggagaagtcgctgcctgca
aaggtggagcagatcctgagggtggaaatgtctgcgtcgcagaaacagtattacaagtgg
atattgaccagaaattacaaggcgctgtctaggggtgtgcgaggcacctcctcgagcttc
ctcaacatcatgatggagttgaagaaatgctgtaaccactgttacctggtgaagccaccg
gaggacagcgagcaccacagctggcaggaggagctccagaacctgatcaagagtagcggc
aagctgatcctcctggacaagctgatgacgaggctgagggagagggggaaccgtgtgctg
atcttctcccagatggtgcggatgctggatattctggccgagtacctgagcatcaaacac
tatcccttccagcgtttggacgggtctataaaaggggagttgagaaaacaagccttggat
cacttcaatgccgaaggctcggaggatttctgtttcttgctctcgacccgggcaggcggg
ctgggcatcaacctagcctcggcggacactgtcatcatcttcgactcggactggaacccc
cagaatgacctgcaggctcaggccagagctcacaggattggccagaggaagcaggtgaac
atctaccggctggtgaccaaaggtacggtggaggaggacatcatcgagagagccaagaag
aaaatggtgctggatcacctggtcatccagagaatggacaccacggggcgcacagtgttg
gacagctcggctcggccttcccattcaacgccgttcaacagagaggaactgagtgcaatc
ctgaagttcggggcggaagagctattcaaagagccggaaggggaggaatcggagccgcag
gaaatggacatcgaagagattctgcggctggcagagacccgagagaacgaggggtctgtc
agccccactgacgaactgctgtcacagttcaaggtggccaacttctccaccatggaggag
gctgagcctgagactgaggtcgggaaccagaaagagtgggatgacattatcccggaggag
cagcgcaggaagatcgaagaagccgagcggcaaaaggaactcgaggagatctatatgctg
cctagaagcaggagctctactaaaaaggctcgggtgaatggcagtgattcagacgtgggc
tcgcggcggcggcgacagcaatcctctggctctgatagtgagactgacgagagcgatgat
gaagataagcggcccaagcgccgggggagaccccggactgtccgtagggacatggtggac
ggtttcacagactctgagatcagacggtttatcaagagctacaagaagtttgggaccccg
cttgaacggctggaggccattgctcgggacgcagagctggtggagaagtccatcgctgac
ctcaagcgcctgggggagcttatccacaatggctgtgtgctggcgctcaaagagtacgag
gagcagcttaaagaaaccccaggcatggaggggaaaggtccggggaagaagcgtgggccg
accatcaaagtgtccggtgtgcaggtgaatgtcaagtccatcctgatacatgaggaggag
tttgaggtgctgcacaaggccctccccagcgagcccgaggacaggaagaagtaccgcttc
ccctgccacaccaaggctgcccacttcgacacagactggggagtggaggaggactccagc
ctgctgctgggcatctatgactgtggctacggcaactgggagcagataaagatggacccg
gcactgcagctgacaggcaagatcctccccagtgaccctgatctgaagccccaaggcaag
cagctgcagtccagggccgactacctcatcaaactgctgaagaaagacatggtcaagaag
gaagctttgaaccacgaggcagagcctaagccgaggaagaggaagcagagagtgaagaag
gagaacaaggcacccagactgagggatgaaggtggcacggacatggcctctccccgcctt
tcagacaacccatccgaggagggagagctgaaggacggagcgctggacaggacccctgtg
aaaaagaaactcaaaacgaaagacaacaaagagaacaaggacaagagccagctgaagaaa
gagaaggatagacagaaagagaaaaagaagagcagagagaagagagccaaggcacggtcc
gaagggaaggacaagagttgcaaatctgtgaccaagggtccggtgcacatcacggcgggc
agcgaccccgtacctatcggggaggagggggaggatgagctcgaccaggaaaccttcggc
atttgtaaggagcggatgaggcctgtgaaaaaggccctgaagcagctggacaagcctgag
gagggcctgtctgagaaggagcagctccagcacacgcgcagctgcctgctgaagatcggt
gaccgcatcaccgagtgcctgttggcctacaccgactctgaggaaaccaagcactggcgc
aggaacctctggatctttgtctcgaagttcacggaatttgatgccagaaagttgcacaag
ctgtataaactcgctcagaagaggcgatcccaggaggaggaggagcagaggaagaaggag
agcagtgccgggagccggaagctgttccggcccgagacctcaggctccagtcacgattct
atcaactctcagccccacggccccccatctctgtatccacccctcccccaccacctgccc
cagctaccgcccgggcaccaccgtggctcatacacacagctccacaatcgcccgttcaac
aatacagatcggggagagcggccgagagagcgaatgtacaactacggcggtgggggcggg
ggtccttggggtcccgacaggcaccatgtgtatgagcagcaccgctacaaggagcatcac
tacggcgaccgcaggcctcgctctgaccctcaccgcaactccggcaattacagactcaat
aatatccaccgcaagaggccctacagcccctacagcaacgaccgcgagcgccgcggacac
cgggaatattatgacaggcggcaccaggatgggaagcgacggcggtcagacgagttccga
cctcaggaccatcataacccctgccatcagacagacccccggagacccccggaccacagg
ccccctgggccataccacagccagggaccctcggaacactacagaagctttcaccccgac
aggccagcagagcaccgctcacctctggctcagaaatcccctcacgactcaaaatcaccc
ctagagcactcgctggaacacaaggggaccccagactacagctggagcactcgcaagaca
tag
DBGET
integrated database retrieval system
