Callorhinchus milii (elephant shark): 103188606
Help
Entry
103188606 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-16
KO
K16507
protocadherin-16/23
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103188606
Cell adhesion molecules [BR:
cmk04515
]
Cadherins
Cadherin related
103188606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_4
Cadherin_pro
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
103188606
NCBI-ProteinID:
XP_042189925
LinkDB
All DBs
Position
Unknown
AA seq
2744 aa
AA seq
DB search
MEARTSANNSLYAVRLQSQMLQWRSLADVAGHITSVQLEPEPSVTHTEVLASDADSGGYG
EVRYSLSSGPGGLSPTQFSIDERTGEICTTRSLDRDEETSVYHLTVTAVDGGGLRSEASV
KVYVDDVNDNRPIFYPLGYAVSLSTQSLPGTAVLTVTAQDKDGGNNGRVTYRIVTGNDPP
LFTLNPNTGLLSLAGSLQGRGNSVWCLGISARDGGGLSSLLNAEVNISVVSGVVSPPHFQ
QTQYFFTVSEEVAIGTIIGTVSARNPPGLADAIHYSISGGDPGGYFAVDGSGRLRTALLL
DHEETAGVSLVVQAQSGSPPAYSTTRVTITIADINDNSPVFPVPSEAILLAEGTPVGTVI
YTLVATDRDSGANGQLRYEAVSGAEGTFSVERSTGHVRLIGLLDYQHVSHYQITVLARDC
GVPPRSATFTLLAHVRDGTGDAPAFDTLTYRVEVREGTAPGTRFLQVRAMGTERTGTAGT
GYTLTYHLRTDGDSAAFGIAPDTGWLYVRSALDRERKALYRLTVEASGSQRGRTGTAGVT
VTITDENDNPPRLGEERYFFTVRENQPPGTQVGRVLATDRDHGNNGRLAFHLVSGNLPLR
IHPHTGELSTKVKFDREQQAAHQVTVVVQDGGTPPRSASGTVYVTVLDENDNAPVFAHNI
VGHELVFQVSEGKPSGVVLGTVQAKDPDEGENGTVVYSLSGPWAERFSVEPVSGEVRTVT
TLRQSERSEYQLILTAKDRGRPALTSSSTLSVQVLSSSAAPSPPVSTVLFTVVEGTVPGS
LVGQVGPRAVVPGGEVTYAVLDGEDAEGLFLVERASGAVFLGRTLDYEEAPSYRLRLEET
ELGPGTAHTRVIVVDVRVLDRNEHAPRFPAALLTVIVPENSAIGTSLYTFQASDQDGPGP
NSDVRFSILRQSPAGDYFRLEPVSGVLTCRAPVDRELTPGFLLVIRATDQALNTSQRLAS
TVTARVFVTDQNDNSPVFRSLPRVAVLEDQPLRFALHRLVATDPDLGQNSQLRYRLSHGN
TGQAFQLEPDTGLLSIVKRLDRESQSDYNLTVLVSDQGSPPRSASQLLRVQVLDVNDETP
TFSQSMYTAHVLENQPAGXSILRLLASDRDQGSNAELTYGAVTSDAFIIHPSSGDIHTRR
ALDREQQEEHIFTVYVQDGGEPPRLATASVLVTVVDENDNAPRFQPDLLSLQLPENQPPL
RLHTSPAIDLDTGSNARLHYTITEGDPDRDFTVDLLTGELATQRGLDRELTPSYSLTIMA
MDGGSPPRSGTLSVRVRVLDVNDNAPAFGEDTYTVEVPEDAAVGTLVLALTATDPDEGSN
GHVRYLLTNESLGMFLVNDGGRVTTAAPLDRETRASYRFLVRAVDCSPSAPRTATARVTV
NIGDVNDHAPSFLTDPLLLTVSRYTPANQPLVTMRAEDRDAGPNASIFYRFSRPLSGFSI
NSFTGEVRLLGSLAALSRAQRTLLVVATDQGSAPRSATGVVIIRLQEEIHHGISFSRSPD
ITLPENPTAGTTVARVRAQYPDGSTRGILYSIFSGNEDNVFSIRPNTGEILVREGSRLDY
ERRARLRLVVKAEASLSFSYTNVSLNLQDVNDNSPRFQLQHYTAFIWEAQRYSSPITQVL
ANDEDQGANGQVTYAIAGSTQSGLFTINPQNGAISTSAIMDREIWAQTVLKLTATDRGSP
RMVGTATLTVVILDLNDNSPTIPLPREIRVPEDLQVGTEITRVTGNDVDSGPGLAYELLG
DVEVFSVEQYRGGISLRRPLDFERRSAYLLTIRSSDSLHSSQANLTILVQDINDNPPSFV
RDLYQVMLPENTVSDTVVVTVTATDRDSGNNGKITYRLMAASADGFSIDPHNGTLFTEGS
LVFGSNPVVREVVIEACDGGSPALSAFTTVQIQVTDVNDHAPEFSQAGYTARVREDLLPG
TTVLSLEAMDSDRSPENAGLDYAIVGGNTGNAFQLASGVRAGTAGRPVAVAWLVLTEKLD
FETVRSYNLTVSATDRGVPPRRAAVSALLTVLDTNDNPPVFERSRYRAALSEAAPVGSEV
ARPWARDADTAGKGGALRYAITSGDEGGLFVVEPGSGAVRLARPLDRECRARHVLILEAS
DAQGEGPGAKGPGDAGGHTALVPLTVEVGDVNDNLPFFPLPRLTVTVPENQPPHTLVTRL
RALDMDAGLYGQLYYWLGPGPGPGMALGPDSDPGLGPGLGAFYLNSSTGELRTLRPLDYE
RLGAYRLLAWARDPGNASASMTVSVLVAGEDEYQPVFGQETYSFSVPAGARRGQLIGRVQ
ASDEDGGADGQLVYSLAEASPYFRVDQATGELLLRVDSGPRPREDAEAEPQPPEQARSMT
LNIQARGPLPGSRSASSLATVDVTQTTFGLEPEARPGAGRLLMVAALAASLGGGGILAAL
GLALVVLRARRRRELPPGEKRAGQAEDEETLRKVGPKAGLASQQQQPPPPPPERLYHQAL
PGYPEPPPPVTTYTRGGSIDPSHSSGRGSADAAAEEDDDEIRMINEHPRAASASSASPHG
HPGTRGPDSGIQQDADRLSDTSTEAASDWCRHRKGLGLAPGPVPLLGFREAGTARAGDPG
FTLDGRPEAAGSLTAIVASDEELRGSYSWDYLLDWSPRFQPLASVFTEIARLKDESGPRA
RGSKPPPEPRIDPPPLITAVAHPNAMSVPPRPAPAALLLHPGLRPHPLPGLGPRSPLPGR
ASASAAMSPSFSPSLSPLAARSPAASPFDPSSRPPPLLSAGEPV
NT seq
8235 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaggacatcagccaataactccctctacgctgtccgtctacagtcccagatg
ttgcagtggagaagtctggcagatgtggcaggacacataacatctgtacagctggagcct
gagcccagtgtgactcacaccgaggtcttggctagcgatgctgacagtggtggttacggt
gaggtgcggtactctctgagctcggggccgggggggctgagccccacgcagttcagcatt
gatgagaggacgggggagatctgcaccacgcgcagcctggacagggacgaggagaccagc
gtataccatctcaccgtcaccgccgtggacgggggtgggctgaggtccgaggcctctgtg
aaggtgtacgtggacgacgtgaatgataaccggccaatcttctaccctctggggtacgcg
gttagcctgagcacgcagagcctgccaggcaccgccgtgctaaccgtcaccgcacaggac
aaggacggcggcaacaacggcagagtcacgtaccgcatcgtgaccggcaacgatcccccg
ctcttcaccctcaacccaaacaccggattgttgtctctggctggctctctgcagggccga
ggtaacagcgtgtggtgtttggggatatcggcgcgggatggtggggggctgagctcgctg
ctgaacgcggaggtgaatatcagtgtggtgtccggggtggtctcccctccgcacttccag
caaacacagtacttcttcaccgtgtccgaagaggtggccatcggcaccatcattggcacc
gtgtctgcccgcaaccccccaggcctggctgacgccatccactactctatctcggggggt
gaccccggcggttactttgcggtggatggctctgggaggctgcggactgcgctgttgctg
gaccatgaggagactgcgggggtctcattggtggtgcaggctcagagcggctctccgcca
gcctacagcaccacccgtgtcaccatcaccatagccgacatcaacgacaactctcccgtc
ttcccggtgccgagcgaggccatcctactggcagagggcacgcccgtgggcaccgtcatc
tacacgctggtggccaccgaccgcgatagcggtgccaacggacagctgcgatacgaggca
gtctcaggagccgagggcaccttcagtgtcgagcgcagcactgggcatgtgcggctgatc
ggattgctggactaccagcatgtgtcccattaccagatcacggtgctagccagggactgt
ggtgtgcccccgcgcagcgccaccttcaccctcctcgcccacgtgagggacggcactgga
gacgcccctgcatttgacacgctaacgtaccgtgtggaggtgcgtgagggcacggctcca
ggcacacgcttcctccaggtgcgcgccatgggtacggagcggacaggtacagcgggcacc
ggctacaccctcacctaccacctccgcactgacggtgattcggctgctttcggcattgcc
cccgacacgggctggctgtatgtgcggagtgcactggatcgtgagcgcaaggcactgtac
cggctcaccgtggaggcctccggcagccagcgtggcaggacgggcaccgccggggtcacc
gtgaccatcactgatgagaacgacaaccccccccggctcggcgaggaacgctacttcttc
accgtccgtgagaaccagccaccgggcacccaagtcggccgtgtcctggcgaccgatcgg
gaccatggcaacaacgggcggttagcatttcacctggtatctggcaatctgcccctccgc
atccacccacacacaggagagctcagcaccaaggtgaagtttgaccgggagcagcaggcg
gcccaccaggtgacagtggtggtccaagatggcggcacccctcctcggagcgccagcggc
actgtgtatgtcaccgtcctggatgagaatgacaacgcacctgtgtttgctcacaacatc
gttgggcacgagctggtgttccaggtttctgaagggaaaccctcaggtgttgtgttgggc
actgtacaggcaaaggacccagatgaaggagagaacgggactgtggtgtactctctgtca
gggccctgggctgaacgtttctctgtggagccggtgtcgggggaggtgaggacagtcaca
accctgcggcagtcagagcgcagcgagtatcaactaatcctcacagccaaagaccggggg
cggccagcactcaccagctccagcaccctgagtgtccaggtgctgagctcctctgcggcc
ccttcgcccccagtcagcacggtcctgtttacggtggtggagggcacagtgccgggctcg
ctggttggccaggtggggccgcgggcagtggtgccggggggggaggtgacgtacgcggtg
ctggatggcgaggatgccgaggggctgttcctggtggagcgagcgagcggcgccgtgttt
ctgggccggaccctggactacgaggaagcccccagctaccggctacggctggaggagacc
gagctgggccccggcaccgcccacacccgcgtcatcgtggtggacgtgcgtgtgctggac
cgcaatgagcacgctccccgcttccccgcggccctgctgaccgtgatcgtccccgagaac
tccgccattggcacttccctctacaccttccaggcaagcgaccaggacggtcccggcccc
aacagtgacgtacgcttctccatcctccgccagtcgccggccggtgactacttccggttg
gagccggtgtccggcgtgttgacgtgccgggctcctgtggaccgcgagctgacaccaggc
ttcctgctggtgatcagggccacggaccaagcgctgaacaccagccagcgtctggcctcc
accgtcaccgcccgggtctttgtgaccgaccagaacgacaactctccggtgtttcgctca
ctgccgcgggtcgcggtgttggaggaccagccactgcgcttcgccctgcaccgcctcgtg
gccaccgaccccgacctcggccagaacagccagctccgctaccggctcagccacggaaac
accggccaagccttccagctggagcctgacacagggttgctgtctatagttaagcgcctg
gaccgtgaatcacaatcggactataacctgacggtgttggtcagtgaccagggctcgccc
ccccgctccgcatcacagctgctccgggtccaggtcctcgatgtcaatgacgagaccccc
accttctctcaaagtatgtatacagcccatgtgctggagaaccagccggcagggngatcc
atactgcgtctgctcgcttccgaccgtgaccaaggttctaacgcggagctgacgtacggg
gcagtgaccagcgacgccttcatcatccacccgagcagcggcgacatccacacccgccgg
gcgttggacagggagcagcaagaggagcacattttcactgtgtatgtgcaggatggaggg
gagccaccccggttggccacggcgagtgtgctggtcacggtggtggacgagaacgacaac
gctccgagattccagccggatctgctcagcctccagctccccgagaaccagcccccgctc
cgtctccacaccagccctgccattgacctcgataccggctccaatgccaggctccactac
accatcactgagggagacccggacagggactttaccgtcgacctgctgacgggggagctg
gctacgcagcgggggctggaccgggagctcactccctcatactcgctgaccatcatggct
atggacgggggtagtcccccgcgttcggggacactgtcagtgagggtccgggtgctggac
gtcaatgacaatgcacctgcgtttggtgaggacacatacacggttgaggtgccagaggac
gcagcagtgggcacactggtcctggcgctcaccgccaccgaccctgacgagggctccaac
gggcatgtgcggtacctgctaaccaacgagtcgctgggcatgttcctggtgaacgacggg
gggagggtaaccacagctgcaccgctggatcgtgagaccagagcctcttatcgtttcctg
gtgcgggcggtggattgttcgccctccgccccccgcacggccaccgcgcgtgtgacagtc
aacatcggcgatgtgaacgaccacgctccctccttcctcaccgaccctctcctcctcacc
gtgtcccggtataccccggccaaccagccgctcgtcaccatgagggccgaggacagagac
gccggccccaatgcctccatcttctaccgtttctcccgcccgctctccggcttcagcatc
aactcattcactggcgaggtgcggctgcttggctcgctggccgcactcagccgggcccag
cgcacgctgctcgtggtggccactgatcagggctcagccccacgctccgccactggcgtc
gtcatcatccgcctccaggaggagatccaccacggcatcagcttcagccgcagcccagac
atcacactccccgagaacccaacggcagggactaccgtggccagggtcagggcgcagtac
cccgatggctccaccaggggcatcctctacagcatctttagcggcaacgaagacaatgtc
ttcagcatccggcccaacacaggtgagatcttggtgcgggaaggttctaggctggactat
gagcggagggcgaggctgcgcctggtagtgaaggcagaggcttcgctgtccttcagctac
acaaatgtcagcctgaacctacaggacgtcaatgacaactctccccgcttccagctccag
cactacacagccttcatctgggaggcccagcgctacagctctcccatcacacaggtgttg
gccaatgatgaggatcagggagcaaatgggcaagtgacatacgcgattgcaggctccacc
cagagtggcctcttcaccatcaacccccagaacggggccatcagcacctcagccatcatg
gacagggagatctgggcacagacagtattgaagctgacggcaacagatcggggttcccct
cggatggtgggcacagccaccctgacagtggtcattctcgatctcaatgataacagcccc
accatccctctcccccgagagatccgtgtgcctgaggacctacaggtagggacggagatc
acacgtgtgacggggaacgatgtggactcggggccggggctggcctacgagctgttgggt
gatgttgaggtcttcagcgtggagcagtaccggggtggcatctcccttcgccgtcccctg
gacttcgagcgccgcagtgcctacctcctcaccatccgctcctccgactccctacacagc
agccaagccaacctgaccatcctggtgcaggacatcaacgacaacccaccctccttcgtc
agggacctgtaccaggtgatgttaccagagaacactgtgtccgacacagttgtcgtcact
gtcactgccacagacagagattccgggaacaatggcaagattacttaccggttgatggct
gcgagtgctgatggcttctccatcgacccccataatgggacactgttcacagaggggagc
ctggtgtttggcagcaatcctgtcgtgcgggaggtggtgatcgaggcttgtgacggtggc
tctccggcactctcggccttcaccacggtgcagatccaggtgacggatgtgaacgaccat
gcaccggagttcagccaggccggctacaccgcacgtgtgcgggaggacctgctgcctggc
accaccgtgctcagcctagaggccatggacagcgaccggtcaccggagaacgccgggctg
gactacgccattgttggcggcaacactggcaacgctttccagctcgcgagcggcgtgcgg
gcggggacagccggccgccctgtggcggtggcctggctggtattgaccgagaagctggac
ttcgagaccgtccgttcctacaacctgactgtgtcggccacggaccgaggggtacctcca
cgccgggccgccgtgtccgccctactcaccgtgctggacaccaacgacaacccgcccgtg
tttgagcggagccggtaccgggcggcactgagcgaggcggccccggtgggcagcgaggtg
gccaggccgtgggcgcgggacgccgacacggcgggcaaagggggtgcgctgcgctacgcc
atcacctcgggggacgagggggggctgtttgtggtagagccgggcagtggggcggtcagg
ctggcccggcccctggaccgggagtgccgggcgcgccacgtgctcatcctggaggccagt
gatgcccagggcgagggtcctggtgccaagggccccggtgatgctggcggccacacagct
ctggtgcccctcaccgtggaggtgggagatgtcaatgacaacctgcctttcttcccactg
cctcgcctgaccgtcacggtgcccgagaaccagcctccccacaccctggtcacccggctc
cgtgcactggacatggacgccgggctgtacgggcaactgtactactggctgggcccaggc
ccaggccccgggatggcgctggggcctgactcagaccccggcctaggcccaggcctcggc
gccttctacctcaacagcagcacgggcgagctccgtacgctgcggccgctggactacgag
aggctcggagcctaccggctgctggcctgggcccgggaccccggcaacgcctcggcctcg
atgacggtgagcgtgctggtggccggggaggacgagtaccagcccgtgttcggccaggag
acctacagcttctcggtgccggcgggggcccggcgcgggcagctcataggccgggtccag
gcctcggacgaggacggcggtgcggacgggcagctggtttactcgctggccgaggcctcg
ccgtacttccgagtggaccaggccacgggggagctgctgctgcgggttgacagtggcccg
aggccccgggaggacgcggaggccgagcctcaacccccagagcaggcccgaagcatgacg
ctgaatatccaggcccgcgggccgctccccggctcccgctccgcctcgtccctggccacc
gtggacgtgacgcagaccaccttcgggctggagcccgaggcgaggcccggggccgggcgg
ctgctgatggtggcggcgctggcggcctcgctgggcggcggcgggatcctggccgccctg
gggcttgcgctggtggtgctgcgggctcggcggcgccgggagctgccgccgggggagaag
cgggcgggccaggccgaggatgaggagacgctgaggaaggtcggcccgaaagcgggcctc
gcctctcagcagcagcagccgccgccgccgccacccgagcggctgtaccaccaggcgctg
cccggctaccccgagccgccgccgcccgtcaccacctacacccgcggcggctccatcgac
ccgtcgcactcgagcggccgcggctcggcggacgcggctgccgaggaggacgacgacgag
atccggatgatcaacgagcacccgcgggcggccagcgcctcctcggcctcgcctcacggc
cacccgggcacccgcggccccgactcgggcatccagcaggacgccgaccgcctgtccgac
acctcgaccgaggccgcctccgactggtgccggcaccgcaagggcctcggcctcgctccg
ggccccgtgccgctgctcggcttcagggaggcgggcacggcccgggctggagaccccggc
ttcaccctggacggtaggcccgaagccgcgggctcgcttacggccatcgtggcgagcgac
gaggagctgcggggcagctacagctgggattacctgctggactggagcccgcgcttccag
cctctggcctcggtcttcaccgagattgcgcgactcaaggacgagagcggcccccgggcc
cgaggctccaaacccccgccggagccccgcatcgacccgccgccgctcatcactgccgtc
gcccaccccaacgcgatgtcggtgccgccgcgcccggccccggccgccctgctcctgcac
ccgggcctcaggcctcacccgctccccggcctcggcccccgctccccgctccccggccgg
gcctcggcctcggccgccatgtcgcccagcttctcaccctcgctctccccgcttgccgca
cgctctcccgccgcctcccccttcgaccccagcagccggcctcccccgctgctctctgcc
ggggagccggtctga
DBGET
integrated database retrieval system
