Callorhinchus milii (elephant shark): 103189158
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Entry
103189158 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103189158
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
103189158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
103189158
NCBI-ProteinID:
XP_007907656
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MCVEETMAETTSTSAKVSPLESELYFLIARLLSAGPCQKSAEVLVRELEENELLPKRLDW
EGSEHHRSYENFVLSNQHVPPDHLLRICKRIGTLLDKEVPPSVSGVQSLLGAGRQSLLRT
AKDCKQVIWRGSAFAALHRGRPPETPITYGSSPSVVEIIRGRQMTGYGRFSSIFPSGTYQ
HIKMHRRILGHLSSVYCVAFDRTGCRIFTGSDDCLVKIWATRNGRLLSTLRGHSTEISDM
AVNFENTLLAAGSCDKLIRVWCLKTCAPIAVLQGHTGSITSLQFSPMNKGSVRYMASTGS
DGSVCLWQWDPESLKFNNQPLKFTERSRPGVPMICSSFSVGGMFLATGSSDHVIRIYYFG
SGTAEKISELESHMDKVDSIQFSNNGDRLVSGSRDGTARIWRFQFQEWKSILLDMSTKLP
GNGLCPEDDTVAKPKVTMVAWDCHDNTVITAVNNHALKVWNSYTGQLLHILTGHEDEVFV
LEPHPFDSRIILSAGHDGNIFIWDVTKGTKSHHYFNMIEGQGHGAVFDCKFSPDGQHFSC
TDSHGHLLIFGFGCSKTYEKIPEQMFFHTDYRPLIRDANNFVLDEQTQQAPHLMPPPFLV
DVDGNPHPTKYQRLVPGRENCLDEQLIPQLGYVAMSDGEVVEQVIGQQTNEQDEQSIEHS
VLDGIIRNLQQEHDHRVGTEQGGLNSPHSRIGTPARVLRNPSSDMLSLPNVGLRRSGQIE
GVRQMHHNAPRSQIATERDIMAWKRRVVVPDIPTSSIRLQEDYRIAKSEEEVALYTREKK
RRPLHSTQRNDSLVSSEHTKRRMRARRREQHKYRTRAAVEELAQYFHEEAEEASSEEDSN
SAGGSSDEWRSANNSSSDSSSEYSDWTADAGINLQPPKRPTRRRPLRIFSSSEDEHDELA
KKIQRNKKPKKSRGRQQKRPNPLPSGEGTSVEAWRPTKWITDTVPRRSPYVPQMGDEVVY
FRQGHEAYVEAVKKANTYNIHAHKQPWQKMEVRDQEFLKIVGLKYEVGPPTLCCLKLAFI
DHETGKITDKSFSLKYHDMPDVIDFLVLRQFYDEARQRNWQSNDQFRSIIDDAWWFGKVL
RQEPYQSQYPDSHFQCYIVCWDNHEIERLSPWDMEPISENAMYPKNPGSSVPVTVEELEA
LLYKPQEGEWGERSRDEECERIISGIDDLLTLDIATPFNAPVDLHAYPVYCLVIAYLSDL
STIRKRLVNRFYRRISSLLWEVRYIEHNARTFNEPESPIVRSARRITDPLLEFIENKDCT
DSLQIWQDMKDSELDSQEDEEDDTTDVNIPGTSVIRRKRIRRNSRREVNYDIDAWKTQCK
ELVEILFQCEDSEPFRQPVDLFEYPDYRDIIDTPMDLGTIKESLEALSYDSPMEISKDVG
LIFSNAKAYSPNKKSKIYSMTLRLSAYFEDQIRTIISDYRTALKYHQRCQRKQRYKKRPH
SSDASRSSSRASSPERKRKPIKPQAKVEPIATRSTSLSLSRNSTSSPGDSASSEASEHSS
PLYRVRNMRPRTNLLNIPNGSAASSSGSDSEESSSSSAEENEGTVKSTASSPNSQNGSLT
ESVANNSRTRNPVVLSRQKPETATVGPQVNGHRKVPRLSAAAKKRKILSDSDDDEDGGGV
GGGDDDDNESRSEQEKERNSVVRKRKFSSLSEDEDSPSEARSEEDSKSGSSSSRSSKSEK
SSGSSSKLQSQTDSESPSASDLDSDYNVKAKAKVKKGKVNRVRRKAKSRAAASKVTSRLK
SRKRQKIVDSDDEEKEDDDDDDDKDSDFAKRDRACRSSAIKTRNQGRRTVRYDDDDSDTD
SLLHNEIANLAVSRSGRARRIPVRVRD
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggaagaaaccatggctgagaccacctctacctctgctaaagtctctccgtta
gaatcagaactctacttcctaatcgctcgcctactctcggccggtccttgccaaaagtcc
gcagaggtgctggtgcgggaactggaggagaatgagcttcttccaaagcgtctggactgg
gaaggcagcgaacaccacaggagctatgaaaactttgttttatcaaatcaacatgtgcct
cctgatcatctgctgcggatatgcaagaggattggcacactgctggataaagaagttcct
ccaagtgtgtcaggcgtgcaatctctgcttggtgctgggcggcagtcattactacgaact
gccaaagattgcaagcaagtcatatggagaggctctgcgtttgcagctcttcatagagga
agaccgcctgaaacgcccatcacttatgggagctcacccagtgttgtggaaatcatccgc
ggcagacagatgacaggatatggacgttttagttctattttcccttctggtacctatcaa
catatcaagatgcacaggaggattcttggacatctgtcttctgtgtactgtgttgctttt
gatcgcactggatgcaggatttttactggttctgatgactgtctggtgaagatctgggct
acacgtaatggtcgattactctccacactgcgggggcattccactgagatctctgacatg
gctgtgaattttgagaacacattgctagctgctggcagctgtgataaacttatccgcgtt
tggtgcttgaaaacatgtgctcctatagctgtgctgcagggacacactggatctattact
tccctacagtttagtcctatgaataaaggttcagtgcgttacatggcatccacaggatct
gatgggagtgtctgcctttggcagtgggatccagagagcttgaagttcaacaatcagcca
ttgaagttcacagaacggtctcggccaggagttccaatgatctgttcttcatttagtgtt
ggtggcatgttcctagcgaccggcagcagtgatcacgtgattaggatttattactttgga
tctggaactgctgagaagatttctgaattggaatctcatatggataaagtggacagtatt
cagttttccaacaatggtgacagacttgtcagtgggagcagagatggaacagcacggatc
tggaggttccagttccaagagtggaaaagcatcttgctggacatgagtacaaaattacca
ggaaacggcttgtgtccagaggatgatacggtagcaaagccaaaagtgacaatggtagca
tgggactgtcatgacaatactgtcatcactgctgtgaataatcatgcattaaaggtctgg
aattcctacaccggccaattgcttcacatccttactggccatgaagatgaagtgtttgtt
ttggagccacatccatttgactcgagaattattttgtctgcaggccatgatggcaatatc
tttatttgggatgttactaaaggcactaaatctcaccattacttcaacatgattgaaggc
caaggtcatggcgctgtatttgactgcaagttctcaccagatggccagcacttttcctgc
acagattcccatggacatttgctgatatttgggtttggctgcagcaaaacatatgaaaag
attccagagcagatgtttttccacaccgactatcggccgctcattcgtgatgcaaacaac
tttgttctggatgagcagactcaacaagctccccatctcatgcctcctccattcctggtg
gatgtggatggaaaccctcatcctacaaaataccagcggctggtaccagggcgtgaaaat
tgtcttgatgagcaacttataccgcagctgggatatgtggcaatgagtgatggtgaggtt
gtggagcaagtgattgggcagcagacgaatgagcaggatgagcagagcattgagcacagt
gttctggatggcatcatccgaaatttacaacaggaacacgaccaccgggtgggaacagaa
caaggtggactcaacagcccgcacagcaggataggcactcctgcaagagttttaaggaat
cccagctcagacatgttgtcactgcccaacgtgggattgcgacgcagtggtcagattgaa
ggtgtccgccaaatgcatcacaatgccccccgcagtcaaatagccacagagagggacata
atggcgtggaaaaggcgagtggtggtcccggatataccgacgagctctatcagattgcaa
gaagactatcgaattgccaaaagtgaggaagaagtggccttgtatacgcgggaaaagaaa
aggcgcccactccattccacacaaaggaatgattctttggtctcatctgaacacacaaag
agaagaatgagggcacggcgtcgcgagcaacacaaataccgaacccgtgctgctgttgag
gaattggctcagtatttccacgaagaagcagaagaggctagctctgaagaggacagtaat
tcagctggaggctcttcagacgagtggcggagtgcaaacaacagctcaagcgactcctca
agtgagtattccgactggacagcggacgcaggcattaatcttcagccaccgaaaagaccg
accagacgaagacctctgcgtatcttcagcagctcagaagatgaacacgatgagctagca
aagaaaatacaacgaaacaaaaagccgaagaaatccagaggacgacagcaaaagagacca
aatcccttgccatctggagaggggacaagtgtcgaggcatggcgtccgactaaatggatc
acggacactgtaccacgcaggtcaccctatgttccacaaatgggcgatgaggttgtgtac
tttcggcaaggccacgaagcctatgtggaagcggttaaaaaagccaatacatacaacatt
catgcacacaagcaaccgtggcaaaagatggaagtcagggatcaagaattcttaaaaatt
gttggcctgaaatatgaagtgggtcctcctacactgtgctgcctcaagctggcctttata
gaccacgagaccggcaaaattactgataaatcattttctctgaagtaccacgacatgcca
gatgttattgatttccttgtattacgtcagttttatgatgaagcaaggcagaggaattgg
cagtcaaatgatcaatttcggtcaataatagatgatgcctggtggtttgggaaggtgtta
cgtcaggagccgtaccagtcgcaatatccagacagccatttccagtgttacattgtttgc
tgggataatcatgaaattgaaaggcttagtccttgggatatggaacctatttctgaaaat
gcaatgtatcccaaaaaccctggctcgagtgttcctgtgacggtcgaagagttagaagct
ttgctgtacaaacctcaggagggagagtggggcgaaaggtcacgagatgaagaatgtgaa
cgcatcatcagtggcattgatgatcttctgacacttgatatcgcaaccccttttaatgct
cctgtggatcttcatgcatatcctgtgtactgtttggtgattgcctacctgtctgacctc
agcactattaggaagagactggtcaacagattttacaggaggatctcttcattattgtgg
gaagtgagatacatagaacataacgctaggactttcaatgaacctgaaagccctattgta
cgatctgctaggagaattactgacccattgcttgaattcatcgaaaataaagattgcacg
gatagtttacaaatttggcaggacatgaaggatagtgaattggattctcaagaggacgag
gaagatgacacgactgatgttaatattccagggacttctgtcataagaagaaagcgaatc
aggcgcaattcaaggcgggaagtaaactatgacatcgatgcgtggaagacacagtgtaag
gagctggtggagatcctctttcagtgtgaagactctgaacctttcaggcagcctgtggac
ctatttgaatacccggattatagggacattatagacactccaatggacctggggactata
aaagaatcgttagaagcattgagctatgacagtcccatggaaattagcaaagatgtcgga
ttaatcttcagcaatgctaaagcttattcgcccaacaaaaagtctaagatttacagcatg
actctgaggctgtctgcatattttgaggatcaaatccgaacgatcatctccgattacaga
accgccctcaaataccatcaaagatgtcaacgtaaacagaggtacaaaaagcgtccacac
agttctgatgcttcccggtcgagtagccgagcctccagtcctgaacgaaaacggaaacca
ataaagcctcaggccaaagtggaacctatcgctaccagatctacctcactgagtttatct
cggaacagcacaagcagtcctggggatagtgcctccagcgaagcttccgaacattcttcc
ccattgtacagggtcaggaatatgaggccgagaacaaatttactgaacatccccaatggg
tcagcggcttcatcgtcaggatcagatagtgaagaatcgagttcaagttctgcggaagag
aatgaaggcactgtgaaatctactgcctcctctccaaattcacagaatggctccctgaca
gagtctgtggctaacaacagtaggacaagaaaccctgttgtgttatcaagacaaaagcca
gaaactgcgacagttggtcctcaggtaaacgggcacaggaaagtgccccgtctaagcgct
gcagcgaagaaacgcaagatcttgagtgactctgatgacgatgaagatggtggtggtgtt
ggtggtggtgatgatgatgataatgagtcccgttccgagcaggagaaagagagaaatagc
gtagttaggaaaagaaagttttcaagtctttccgaggatgaggactctccctctgaagca
aggagtgaggaggacagtaaatctggctccagtagcagcaggagttccaagagtgaaaaa
agctcgggttccagctccaagctgcaatcccagacagactcggaatccccgtctgcttcg
gacttggacagtgactacaatgtaaaagcaaaggcaaaagtaaagaaagggaaagtgaac
cgggttagaaggaaagcaaagtccagagcagcagcctcgaaagtcaccagtcggttaaaa
agtaggaagcggcaaaagattgtggacagcgatgatgaggagaaggaggatgatgatgat
gatgatgacaaggactctgattttgcaaagcgagatcgagcttgtcgatcctctgccata
aagaccagaaatcagggcagaaggactgtcagatacgacgacgatgattcagacactgac
agcctcttacacaatgagattgccaatttagccgtgtccaggtcagggcgggcgcgacgg
attcccgtgcgagtaagagactga
DBGET
integrated database retrieval system
