Carnobacterium maltaromaticum: BN424_3253
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Entry
BN424_3253 CDS
T02342
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cml
Carnobacterium maltaromaticum
Pathway
cml03030
DNA replication
cml03430
Mismatch repair
cml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN424_3253 (holB)
03430 Mismatch repair
BN424_3253 (holB)
03440 Homologous recombination
BN424_3253 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cml03032
]
BN424_3253 (holB)
03400 DNA repair and recombination proteins [BR:
cml03400
]
BN424_3253 (holB)
Enzymes [BR:
cml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN424_3253 (holB)
DNA replication proteins [BR:
cml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN424_3253 (holB)
DNA repair and recombination proteins [BR:
cml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN424_3253 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
nSTAND3
YwqJ-deaminase
Motif
Other DBs
NCBI-ProteinID:
CCO12674
UniProt:
K8E732
LinkDB
All DBs
Position
complement(3288785..3289780)
Genome browser
AA seq
331 aa
AA seq
DB search
MDNENNLEWLQPQLFNRFKKNLQHGQLAHAYLFEGVPGVGKKEMAIWLSQAIFCLEPEDG
LPCGKCQNCTRILEHQHPDVTELAPDGLSIKVDQVRELKTEFSKSGVEGRQKVFIVEDVE
KMTVGAANSLLKFLEEPEGTVVAFLLTTAKQKILPTILSRCQLVHFSPLSKRMLLTELKK
LEISEKQGALLVHLTNSLESAVEMNRNEWFNEARDIIWKWFQLISQNEKQAFIFVQTDVM
PHFKEREQQMLAFELLLLAYRDALMLLYGSVDQLAYPQHQKILQDFLARSRGKDVTAAIE
TILFSRKKLESNVSAQGVFEQMVLLLMRNSI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaaaacaatttagaatggttacaaccgcaactttttaatcgcttcaaaaaa
aacttacagcatgggcaacttgctcatgcttacctttttgagggcgtaccaggtgttggt
aagaaggaaatggctatttggttgtcgcaagctattttttgcttagaacctgaagatggt
ctaccttgtgggaagtgccaaaattgtactagaattttggaacaccaacacccagacgtt
actgagcttgctccagatggcctttctattaaagtcgatcaagttagagaattaaaaacc
gaattttctaaaagtggtgttgaaggccgtcaaaaagtttttattgttgaagatgttgaa
aaaatgacagttggagcagccaatagtttattaaaatttttagaagaacctgaaggaaca
gtcgtggcttttttattaacaacggctaaacaaaaaattttaccgactattttatctcgt
tgccagcttgttcatttttcaccactttctaaacgaatgttattaactgaattaaaaaaa
ttagaaattagtgaaaaacagggcgctttattagtacatttgaccaatagtttggaatca
gcagttgaaatgaatcgcaatgaatggtttaatgaagctagggatattatctggaaatgg
tttcagttaatttctcaaaatgaaaaacaagcttttatttttgttcaaacagatgttatg
cctcattttaaggaaagagaacaacaaatgctggcttttgaattgttgttgttagcttat
cgcgatgcactgatgcttttgtatggttcagttgatcagttagcttatcctcaacatcaa
aagatactacaagattttctggcaagaagtcgagggaaagatgtaacagcagcgattgaa
acgattttatttagtcgaaaaaaactagaaagtaatgtttcagcgcaaggtgtttttgaa
caaatggttcttttattaatgagaaattctatttag
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