Cucumis melo (muskmelon): 103501916
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Entry
103501916 CDS
T03195
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1 isoform X2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmo03016
]
103501916
Enzymes [BR:
cmo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
103501916
Transfer RNA biogenesis [BR:
cmo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
103501916
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
103501916
NCBI-ProteinID:
XP_008463899
UniProt:
A0A1S3CK86
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Position
11:complement(27498298..27501220)
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AA seq
278 aa
AA seq
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MISNYFPFSFNLLSPPPHSSFSLLSRVVAVDFTVSPPASMAPRWKGKASEAKALADPISS
TVLHLQSSFIQSNARGLLSGSTILYLADEEQTDLLNRTCFGRQILTAEKDKQWFQFGMEE
AFYLSYHLNCLKIVDGQDCEMNFQELWRYMKTQKATFPEFYIAYRHLRLKNWVVRPGSQY
GVDFVAYRHHPALVHSEFAVLVLSEGRDSNGNGRLRVWSDFLCTIRLCGSVAKTLLVLSV
NDNGSEFVSPSCLDSYSIEERTVTRWSPEQCRENPAEV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgatctccaactactttcctttttcttttaacttactctccccgccgccgcactcttct
ttttctcttttatctcgcgttgttgccgtcgatttcactgtttcacctccggcttcaatg
gcgccgagatggaaagggaaggcttcagaagccaaagctctagctgatcccatctccagt
actgtacttcaccttcaatcttctttcatacagtccaacgctcgaggattattatctggt
tctaccatactttatctagccgacgaagaacaaaccgatcttcttaatcgcacttgtttc
ggccgacaaattcttactgctgagaaggacaaacaatggtttcaatttggcatggaggag
gctttttacttgtcctatcacttgaattgcctcaaaattgtcgatggacaagactgtgaa
atgaattttcaagagctttggcggtatatgaagacccaaaaggctacattccctgagttt
tacattgcttaccgacatcttcgattgaagaattgggttgttagacctggatctcaatat
ggggttgattttgtggcgtatcgtcatcatccggctcttgttcactctgaatttgctgtt
ctggtgttgtctgaaggaagagacagtaatggaaatgggcgattgagggtttggtctgat
tttctttgcacaattcggctttgtggaagtgttgctaaaacgttgctagttctttccgtc
aatgataatggaagtgaatttgtttctccttcgtgtttggacagttactccattgaagaa
cgcacagttacgagatggagtccagaacagtgccgtgaaaatcctgcagaagtgtga
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