Cucumis melo (muskmelon): 103502353
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Entry
103502353 CDS
T03195
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103502353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103502353
03029 Mitochondrial biogenesis [BR:
cmo03029
]
103502353
Membrane trafficking [BR:
cmo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103502353
Others
Rab GTPases of specific organelles
Auto phagosome
103502353
Mitochondrial biogenesis [BR:
cmo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103502353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
Nup160
eIF2A
WDR54
Ge1_WD40
Cytochrom_D1
PQQ_2
Filament
Motif
Other DBs
NCBI-GeneID:
103502353
NCBI-ProteinID:
XP_008464485
UniProt:
A0A1S3CM27
LinkDB
All DBs
Position
2:25614444..25617321
Genome browser
AA seq
511 aa
AA seq
DB search
MIMSPNEIANEAIKHALRALRQRHLLEEGAHAPAFLALSRPIITQSSEWKEKAEKLELEL
QQCYKAQSRLSEQLVVEVAEVRTSKSLIAEKEAVIDNLEQELSRTRDECSQLKADLEIKI
KALELALCENQEIKTQLEAMTVKAKNAEAENKMLVDRWMLQKMQDAERLNEANALYEDMI
DRLKASGLEKLAQQQVDGVVRQSEEGAEFFVESTVPSVCKHRIRGHEGGCGTILFENNSG
KLISGGQDRTVKLWDTNTGSLSSTLHGCLGSVLDLAITHDNRSVIAASSSNNLYAWDISS
GRVRHTLTGHSDKVCAVDVSKVSSRYVVSAAYDRTIKIWDLQKGYCTKTFIFASNCNAVR
FSMDGQTICSGHVDGNLRLWDIQTGKLISEVAGHSLAVTSLSLSRNGNTILTSGRDNLHN
LFDIRSLEVCGTLRASGNRVASNWSRSCISPDDNYVAAGSADGSVHVWSISKHDIVSTLK
ESTASVLCCSWSGLGKPLASADRNGIIFTWN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtccccaaacgagatagcaaacgaagcgattaagcacgctctcagagccctc
cggcaacgccatctccttgaagaaggtgcgcatgctcctgcttttctcgctctctctcgc
cccatcataacccagagttcggaatggaaggagaaagcggagaagttggaattggagctt
cagcagtgttacaaggctcaatcacgattatctgagcaacttgtggttgaagttgctgag
gttcgaacttctaaatctttgattgcggagaaagaggctgtgattgataatttggagcag
gaattaagtcgaaccagggatgaatgctctcagttgaaggcagacttagagattaaaatt
aaagctctggaactggctttatgtgagaatcaagaaattaaaacacagcttgaagcaatg
acagttaaagctaagaatgcagaggctgaaaataaaatgttggttgaccggtggatgctt
caaaagatgcaggacgcagaacgtctcaatgaggcaaatgcactctatgaggatatgatt
gaccgactcaaggctagtggtttagagaaacttgctcagcaacaggttgatggcgtggtt
cgccaaagcgaagagggtgctgaattctttgtggaatccactgtaccttcagtgtgcaag
cataggatccgtggccatgaaggcggctgtggtactatattgttcgaaaataactcagga
aagttgatcagtggggggcaggaccgtacagtcaaattgtgggatacaaatactggatca
ttaagttccactctacatgggtgccttggttctgttcttgatcttgccattactcatgat
aatagatctgttattgcagcaagcagttcaaacaacttatatgcgtgggacatcagttct
ggaagggtgcgccatacgttgactggtcactcagacaaagtatgtgctgtagatgtaagc
aaagtttctagccgctatgtcgtgagtgctgcatatgatcgcaccattaaaatttgggac
ctacagaagggttactgcaccaagaccttcatttttgccagcaattgtaatgcagttcgc
ttcagcatggatggacagaccatttgttctggccatgtggatggaaatcttcggttgtgg
gatattcaaacaggaaaattgattagcgaagttgctggacactcccttgctgttacatct
ctttctttgtcacgtaatggcaatacaatattgactagtgggagagataacttgcataat
ttatttgatatccgatctttggaagtctgtgggacattaagggcatctgggaatagagta
gcttccaattggagccgttcttgcatcagtccagatgacaactatgttgcagctggttct
gcagatgggtcagttcatgtgtggtcaatatcaaaacacgatatcgttagcactctgaaa
gagagcactgcatctgttctatgttgttcatggagtgggcttggaaaaccgcttgcgtct
gcagacagaaatggtataatatttacatggaactga
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