KEGG   Cucurbita moschata (crookneck pumpkin): 111445968
Entry
111445968         CDS       T05248                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA3-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111445968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmos04121]
    111445968
Enzymes [BR:cmos01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111445968
Ubiquitin system [BR:cmos04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111445968
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4_4 zf-RING_5 zf-ANAPC11 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 111445968
NCBI-ProteinID: XP_022940316
UniProt: A0A6J1FI46
LinkDB
Position
Unknown
AA seq 260 aa
MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH
LFCWPCIYKWFHVQISSIETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI
TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY
LGNAMVTSLLNPTIGLIGETVYTRIFGSADGSLLPYPPYNHLVAGNVGTRMRRQEMQLDK
SLNRVSIFLFCCFIICLLLF
NT seq 783 nt   +upstreamnt  +downstreamnt
atggatcaaacctattcttcacctgaggcatacttagagtctgaacaagatgtctctctt
aagcaaaactggaaatctatgtcagcccagtcaactgtatccgaagatgcaaatggttgc
ttcgattgcaacatttgcttggactctgcagctgaccctgttgtcaccctctgtggtcac
ctcttctgctggccctgcatttacaaatggtttcatgtacaaatctccagcatcgaaacc
gaaaacacacacaactgccctgtttgtaaggctagcatcactccctcctctttggttccc
ctctatggccgtggcaagtcatattcagattctgaatccaagaagtctcatttgggtata
accgtacctcgaaggccaccaccgtccatgaacaccccgccccattccaatgctgcctct
gcattgcatcctagtgaggaacttcatccaaattatatccgctcgccattgcaccgcatc
tatcaccaacaatatttccctcaggcgtatggtaactttgccccatacgcaccatcttat
ctcggcaatgccatggtaacaagtctgctaaacccgacgattgggttgataggagaaacg
gtttacacaagaattttcggtagtgcagatgggagcttgttgccttacccgccttacaac
cacttggtcgcagggaatgttggcaccagaatgagaagacaggaaatgcagcttgataag
tctctgaatagagtttccatctttctattttgctgctttatcatctgtcttctgttgttt
tga

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