Cucurbita moschata (crookneck pumpkin): 111462377
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Entry
111462377 CDS
T05248
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111462377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111462377
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111462377
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
111462377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Polbeta
Motif
Other DBs
NCBI-GeneID:
111462377
NCBI-ProteinID:
XP_022961680
UniProt:
A0A6J1HCZ5
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MVGSDSSTAFHPAPQPASNYGVTKPISLAGPTDADIQRNIELEKFLIDSGLYESKEEAAK
REEVLGRIDQIVKNWVKQLTLLRGYTEQMVEDANAVIFTFGSYRLGVHGPGSDIDTLCVG
PSYVNREDFFIILHNILAEMEEVTDLQPVPDAHVPVMRFKFMGISIDLLYASISVRVVPE
ELNISHGSVLCNVDEQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNV
TGFLGGVNWALLVAQVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVW
DPRKNPRDRFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFRCGNNICEEIDMSKAQWSA
LFEPYLFFEIYKNYLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPI
EYSDTSKPCSHCAFFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINTYAFWKPGMDIHVS
HVRRKQLPTFVFPDGHKRAKPVRHEGQQADPVCADMLQDQSGITEKGKKRKSDHEETEME
KKQAFASQPAEESPMLETHGGGSDGKLPSLKSANADCYSEVWPSFEQLDSRMDTDGNGMD
IPSLTKETGPTMDQAELAKVMEGSSSTKEVPDLYQGGLSKSEEALQIEMNQEKIEGLASN
MSGSAQTVAIRNFLHWTKDVVRIDSESANPFGQTTGEESTQVDFQPNCNAHNLSCKGNDS
RTDPELALENGSVVTGRVFQNGQPKELEPKFSDQAVPEWS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttcagacagttcaactgcttttcacccggcacctcagccggcgagtaattat
ggtgttacgaaaccgatttctcttgctggaccgacggatgctgatattcagcgcaatatc
gaactggagaagttcttgattgactcggggctttacgaaagtaaagaagaagctgcgaaa
agagaagaggttttgggccgcattgaccagattgttaaaaattgggtcaagcaattaact
ctcctaagaggatatacagagcagatggtggaggatgcaaatgcagtaatttttactttt
gggtcttatcgtcttggggtacatggaccaggaagtgacatagacacattgtgtgttgga
ccatcttacgtgaatagagaagacttcttcatcatcttgcataatattttagctgaaatg
gaagaggttactgatcttcaaccggttcccgatgctcatgttccagtaatgagattcaaa
tttatggggatatcaattgatcttctgtatgcgagcatttccgtacgggttgttcctgaa
gagctgaacatctctcatggatctgtgctgtgcaatgttgatgaacaaactgttcgaagt
cttaatggatgccgagttgcagatcaaattctaagacttgttccaaacgttgagcacttt
cgcacgacactcagatgtttaaagttttgggccaaaagacggggtgtatactccaatgtc
actgggttccttggaggtgtaaattgggcacttttggttgctcaggtatgccagctttac
cccaatgcaattccaagcatgctagtttctcgtttcttcagagtgtacacccagtggcgt
tggccaaatcctgtaatgctatgttcaatagaagagaatgaacttggatttcctgtttgg
gatcctcgtaaaaatccgcgtgatcgatttcatcttatgccaataataactcctgcttac
ccttgcatgaactctagctataatgtctcaactagtactctccgtgttatgatggaacag
ttccgctgtggtaataatatctgtgaggagattgacatgagcaaagcccagtggagtgct
ttatttgagccatatttatttttcgagatatacaaaaactatctacaggtggacataatt
gcagcagatgctgatgatttgctagcttggaaaggatgggtagaatctcgctttagacag
cttaccttgaagatagagagagacaccagggggatgctgcagtgccatccctatcctatt
gagtattctgacacgtccaagccatgttctcactgtgcttttttcatgggcttgcagaga
aaagagggattaagaggccaaggaggccagcagtttgacatacgaggaacagttgatgag
ttcaggcaagagataaacacgtatgctttttggaagccagggatggatatccatgtttct
catgtgcggaggaagcaactgcccacctttgtttttcctgatggacacaaacgggcaaag
ccagtcaggcatgaagggcagcaagctgacccagtttgtgctgacatgctccaagatcag
tctgggatcactgagaaagggaaaaaaaggaaaagtgaccatgaagaaacagagatggaa
aagaaacaagcctttgccagtcaaccagcagaagaatctcccatgcttgaaactcatggt
ggtggatcagatgggaaattgccgagtttaaaatctgcaaatgcagattgttactctgag
gtttggccatcttttgaacagcttgatagcagaatggatactgatggaaatggcatggat
attccatcgttgaccaaggagactggtcctacgatggatcaggcagagctagctaaagta
atggaaggatcttcctcaacgaaggaggtgcctgatctatatcaaggcggtctttcgaaa
tccgaggaagctttacaaattgagatgaaccaggaaaaaattgagggattagcatctaat
atgagtggaagtgcacagacagtagccatcagaaatttcctccattggacaaaggatgtt
gtgaggattgactctgagtcagcaaatccatttggtcaaacgaccggggaagagagtacc
caagttgactttcaaccaaattgcaatgcacataaccttagttgcaagggcaatgatagc
aggacggatccagagttggcgttggaaaatggttccgttgtgactggaagagtgtttcaa
aatggtcaacctaaagagttggagccgaagttcagcgatcaggcagtcccagaatggagc
taa
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