Corynebacterium marinum: B840_01795
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Entry
B840_01795 CDS
T03633
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cmq
Corynebacterium marinum
Pathway
cmq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B840_01795 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmq03021
]
B840_01795 (rpoB)
03400 DNA repair and recombination proteins [BR:
cmq03400
]
B840_01795 (rpoB)
Enzymes [BR:
cmq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B840_01795 (rpoB)
Transcription machinery [BR:
cmq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B840_01795 (rpoB)
DNA repair and recombination proteins [BR:
cmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B840_01795 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AJK67987
UniProt:
A0A0B6TDI5
LinkDB
All DBs
Position
363664..367146
Genome browser
AA seq
1160 aa
AA seq
DB search
MAVSRQTKSVADIPGTPKRYSFSKNAEPIEVPGLLDLQRESFAWLIGTPEWRARQQEERG
PEARVTSGLEDILDELSPIQDYSENMSLSLSAPRFEDVKHTIDECKDKDINYSAPLYVTA
EFINNETQEIKSQTVFIGDFPMMTNKGTFIVNGTERVVVSQLVRSPGVYFDQTIDKSTER
PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTAEQIKERFGFSEI
MMSTLESDGVANVDEALLEIYRKQRPGEQPTRDLARSLLDNAFFRPKRYDLARVGRYKVN
RKLGLGGDHDGLMTLTEEDIATTLEYLVRLHTGERTMTSPIGEVIPVNTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGPNIGLIG
SLASYARVNAFGFIETPYLKVVDGKVTDEMHYLTADEEDRYAIGQASVERDAEGNITSDR
IEVRVKDGDIAVTDGKGVDFIDVSARQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRAEAPYVGTGMEKRAAYDAGDMVITPKSGVVENVSADLITIMDDEGIRDTYLLRKFERT
NQGTCYNQTPLVDMGQRVEAGQVIADGPGTHHGEMSLGRNLLVAFMPWEGHNYEDAIILN
QRIVEEDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLRDLDDRGIVRIGADVRA
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGENGKVIGVRRFAREDD
DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMPFMPDGTPVDIILN
THGVPRRMNIGQVLEIHLGWLAAAGWTVDPAVVENAELIETLPEELYDVPANSLTATPVF
DGASNQEIAGLLANSKPNRDGDVMVNPDGKAMLFDGRSGEPFPYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLAADGTPMELSGDDDDDLDA
GGSSLGINLSHDERSDVDAS
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccaagtcagtggccgatatccccggaactcccaagcgttac
tcgttctcgaagaacgctgagccgattgaggttcccgggctccttgacctgcagcgtgaa
tccttcgcatggttgatcggtacgcccgagtggcgcgcccgccagcaggaggagcgtggg
ccggaggcccgcgtcaccagtggtcttgaggacattctcgacgagctcagcccgatccag
gactactccgagaacatgtccctttccctgtccgccccgcgattcgaggatgtcaagcac
accatcgatgagtgcaaggacaaggacatcaactactccgcgccactgtatgtgactgcg
gagttcatcaacaacgaaacccaggagatcaagtcccagaccgtcttcatcggcgatttc
ccgatgatgaccaacaagggcacgttcatcgtgaacggcaccgagcgtgtcgtggtctcc
cagctggtccgctccccgggcgtgtacttcgatcagacgatcgacaagtcgaccgagcgt
ccgctgcactccgtgaaggtcatcccgtcccgtggcgcatggctggagttcgacgtggac
aagcgcgacaccgtcggtgtccgcatcgaccgtaagcgtcgccagcccgtcaccgtcctg
ctcaaggcgctcggctggaccgccgagcagatcaaggagcgcttcggcttctccgagatc
atgatgtccaccctcgagtccgacggcgttgccaacgtcgacgaggctctgctggagatc
taccgcaagcagcgtccgggcgagcagcccacccgcgatctcgcgcgttccctgctcgac
aacgccttcttccgcccgaagcgctacgacctggcccgggtcggccgctacaaggtcaac
cgcaagctcggcctcggcggcgaccacgacggtctgatgacgctgaccgaagaggacatc
gccaccaccctggagtacctggtccgcctgcacaccggcgagcgcaccatgacgtcgccg
atcggcgaggtcatcccggtcaacaccgacgacatcgaccacttcggcaaccgccgtctg
cgcaccgtcggcgagctcatccagaaccaggtccgcgtgggcctgtcccggatggagcgt
gtcgtgcgcgagcgcatgaccacccaggacgccgagtcgatcaccccgacctcgctgatc
aacgtccgtccggtctcggccgcgatccgcgagttcttcggcacctcccagctgtcgcag
ttcatggaccagaacaactcgctgtcgggtctgacccacaagcgccgtctgtccgccctc
ggcccgggcggcctgtcccgtgagcgcgccggcatcgaggtccgcgacgtgcacccgtcc
cactacggccgcatgtgcccgatcgagacccctgagggcccgaacatcggcctcatcggc
tcgctcgcgtcctacgcccgcgtcaacgccttcggcttcatcgagaccccgtatctcaag
gtcgtcgacggcaaggtcaccgacgagatgcactacctcaccgccgacgaggaggaccgt
tacgccatcggccaggcctccgtcgagcgcgacgcggagggcaacatcacctccgaccgc
atcgaggtccgcgtcaaggacggcgacatcgccgtcaccgacggcaagggtgtcgacttc
atcgacgtctccgcccgccagatggtctccgtggccaccgccatgattccgttcctcgag
cacgacgacgccaaccgtgccctcatgggcgcgaacatgcagcgccaggctgtgccgctg
gtccgcgccgaggccccctacgtgggcaccggcatggagaagcgcgccgcctacgacgcc
ggcgacatggtcatcacgccgaagtccggcgtcgtcgaaaacgtctccgccgacctgatc
accatcatggacgacgagggcatccgggacacctacctgctgcgcaagttcgagcgcacc
aaccagggcacctgctacaaccagaccccgctggtcgacatgggccagcgcgtcgaggcc
ggccaggtcatcgctgacggtccgggcacccaccacggcgagatgtcgctgggccgcaac
ctgctggtcgcgttcatgccgtgggaaggccacaactacgaggacgcgatcatcctcaac
cagcggatcgtggaggaggacatcctcacctcgatccacatcgaggagcacgagatcgac
gcccgcgacaccaagctgggcgccgaggagatcacccgtgagatcccgaacgtctccgag
gacgtcctgcgcgacctcgacgaccgcggcatcgtccgcatcggcgccgacgtccgcgcc
ggcgacatcctcgtgggcaaggtcaccccgaagggcgagaccgagctgaccccggaggag
cgcctgctgcgcgccatcttcggcgagaaggcccgcgaggtccgcgacacctccatgaag
gtgccgcacggcgagaacggcaaggtcatcggtgtccgccgcttcgcccgcgaggacgac
gacgatctggcgccgggcgtcaacgagatgatccgcgtctacgtcgcccagaagcgcaag
atccaggacggcgacaagctcgccggccgccacggcaacaagggcgtcgtgggcaagatc
ctgccgccggaggacatgccgttcatgccggacggcaccccggtggacatcatcctgaac
acccacggtgtcccgcgccgtatgaacatcggccaggtcctggagatccacctcggctgg
ctcgccgccgccggttggaccgtcgacccggccgtcgtggagaacgccgaactgatcgag
accctccccgaggagctctacgacgtcccggccaactccctgaccgccaccccggtcttc
gacggcgcctccaaccaggagatcgccggcctgctcgccaactccaagccgaaccgcgac
ggcgacgtcatggtcaacccggacggcaaggcgatgcttttcgacggccgctccggcgag
ccgttcccctacccggtctccgtgggctacatgtacatgctcaagctccaccacctggtg
gacgagaagatccacgcccgctccaccggcccgtactccatgatcacccagcagccgctc
ggtggtaaggcccagttcggcggccagcgcttcggtgagatggaggtgtgggcgatgcag
gcatacggcgccgcctacaccctgcaggaactgctgaccatcaagtccgacgacgttgtc
ggccgtgtcaaggtctacgaggccatcgtcaagggcgagaacatcccggacccgggtatc
cccgagtccttcaaggttctgctcaaggagctccagtccctgtgcctgaacgtcgaggtc
ctcgccgccgacggcaccccgatggagctgtccggcgacgatgacgacgatctcgacgcc
ggcggatcctcgctgggcatcaacctgtcccacgacgagcgttccgacgtcgacgcgtcc
taa
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