Clavibacter sepedonicus: CMS0891
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Entry
CMS0891 CDS
T00678
Symbol
rafA
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00052
Galactose metabolism
cms00561
Glycerolipid metabolism
cms00600
Sphingolipid metabolism
cms01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CMS0891 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
CMS0891 (rafA)
00600 Sphingolipid metabolism
CMS0891 (rafA)
Enzymes [BR:
cms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
CMS0891 (rafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Motif
Other DBs
NCBI-ProteinID:
CAQ01007
UniProt:
B0RFE8
LinkDB
All DBs
Position
complement(932087..934270)
Genome browser
AA seq
727 aa
AA seq
DB search
MPDTAVPSALLHLRASGVSLVLDLTEGRLPAVVHWGADLGDTTPADLETMVRADLAPFAG
SVADDPIRLAILPEAHTSWTGKPGLEGHRDGADWSPLFRVTSATVDGDPLPVGVDGRPGS
ASTGPALVHVDAVDEVAGLGLALDVELLASGLVRKRAEATNLGDTTYDLGGVTLALPLPP
EAREILDFAGRWGLERTPQRRELVVGIHEREGRKGRTGPDAATLLSVGTPGFGFRHGDVR
GVHVAFSGNHRHYAERLSTGRQVIGGGELLLPGEVRLAAGESYASPWVYAAFGHGLDDQA
ARFHRHLRARETHPRRDRPMTINVWEAVYFDHDLARLTDLADRAAALGVERYVLDDGWFR
HRRDDHAGLGDWYLDEGVWPDGLGPIIDHVTGLGMEFGLWFEPEMVNEDSDLARAYPEWI
MQTGGRLPVRARQQQVLDLAIPEAYSYVLERMTAILAENDIAYIKWDHNRDLVDAGISPR
GQAGVHLQTLAAYRLMDELRARFPGLEIESCSSGGARVDLGVLERTDRVWVSDCIDPLDR
QTMMRWTMQLLPPELLGSHIASGVSHTTGRAHRLAFRAGSALYGHLGIEWDLAQATDEEN
ADLAAWIALYKEERALMHTGTVVRADESDPTLLVYGAVASSSDAALFFLASVGRSEVSPR
GRFLLPGLDPARRYRVEPVRVDTPEPGFTAPAWWDGVELTGQALAASGLHAPGMLPESIA
ILRVTAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgccgtcccctccgccctcctccacctccgggcatccggcgtctcgctc
gtgctcgacctcacggagggccgcctcccggccgtcgtgcactggggcgccgacctcggc
gacaccaccccggccgacctcgagaccatggtgcgcgcggacctcgcgccgttcgcgggc
agcgtcgccgacgatcccatccgcctcgcgatcctgcccgaggcgcacacctcgtggacg
ggcaagcccggcctcgagggccaccgcgacggcgccgactggtcgccgctcttccgcgtc
acctcggccaccgtcgacggcgatccgctccccgtcggcgtcgacgggcgcccgggatcc
gcgtccaccggccccgcgctcgtgcacgtcgacgcggtcgacgaggtcgcggggctcggc
ctcgctctcgacgtcgagctgctggcgtccggcctcgtccgcaagcgcgcggaggccacg
aacctcggcgacacgacctatgacctcggcggcgtcacgctcgcgctgccgctgccgccc
gaggcccgcgagatcctcgacttcgccggacgctggggcctcgagcgcacgccgcagcgc
cgggagctggtggtggggatccacgagcgcgagggccgcaagggccgcaccggacccgac
gccgcgaccctgctgtccgtcggcacgcccggcttcggcttccgccacggcgacgtgcgc
ggcgtgcacgtcgcgttcagcggcaaccaccggcactacgccgagcgcctctccaccggc
cggcaggtgatcggcggcggcgagctgctgctccccggcgaggtgcggctggccgcgggc
gagtcgtacgcgagcccgtgggtctacgcggcgttcggccacggcctcgacgaccaggcc
gcccgcttccaccgccacctgcgcgcccgcgagacgcacccgcgccgcgaccggcccatg
accatcaacgtgtgggaggccgtctacttcgaccacgacctcgcgcgcctgaccgacctc
gcggatcgcgcggcggccctcggcgtggagcgctacgtgctcgacgacggctggttccgc
caccgccgcgacgaccacgcgggcctcggcgactggtacctcgacgagggcgtctggccc
gacggcctcggcccgatcatcgaccacgtcacgggcctcggcatggagttcggcctgtgg
ttcgagcccgagatggtgaacgaggactccgacctcgcgcgcgcttaccccgagtggatc
atgcagaccggcggccgcctccccgtgcgcgcccgccagcagcaggtgctcgacctcgcg
atccccgaggcgtactcctacgtgctcgagcggatgaccgcgatcctcgccgagaacgac
atcgcctacatcaagtgggaccacaaccgcgacctcgtcgacgccggcatctccccgcgc
ggccaggcgggcgtgcacctgcagacgctcgcggcgtaccgcctcatggacgagctgcgg
gcgcgcttccccggcctcgagatcgagtcgtgctcctccggcggagcccgcgtcgacctc
ggcgtgctcgagcgcaccgaccgcgtgtgggtctccgactgcatcgaccccctcgaccgc
cagacgatgatgcgctggaccatgcagctcctcccgcccgagctcctcggctcccacatc
gcgtccggcgtcagccacaccaccggccgcgcgcaccgcctcgccttccgcgcgggctcg
gcgctgtacggccacctcggcatcgagtgggacctcgcgcaggccaccgacgaggagaac
gccgacctcgccgcgtggatcgccctctacaaggaggagcgcgcgctgatgcacacgggc
acggtcgtccgcgccgacgagagcgacccgacgctcctcgtctacggcgcggtcgcgtcg
tcgtccgacgcggcgctgttcttcctcgcgtcggtcggccgctccgaggtctccccgcgc
ggccgcttcctgctgccgggcctcgatcccgcgcgccgctaccgcgtggagcccgtgcgc
gtggacacccccgaaccgggcttcaccgcgcccgcctggtgggacggcgtcgagctgacg
ggccaggcgctcgcggcctccggcctgcacgccccggggatgctgcccgagtcgatcgcg
atcctgcgggtgacggcggtctga
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integrated database retrieval system
