Cordyceps militaris: CCM_09522
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Entry
CCM_09522 CDS
T03108
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2, putative
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
cmt
Cordyceps militaris
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmt03016
]
CCM_09522
Enzymes [BR:
cmt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CCM_09522
Transfer RNA biogenesis [BR:
cmt03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CCM_09522
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
18171524
NCBI-ProteinID:
XP_006674718
UniProt:
G3JUC5
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MTEIKISLPLTAVPEDSAPPKPNGKTVPKRRGLPLHQIYSLPVPIRTFPLPAFYPNNPIS
IIHVAYAWLKQTVRPPPAEPSIVYHGVWSEGTNSVHITDETFMRGLWEQGFFGKGSLSRS
EPSWLRRELVRKGLEATHVSEIHTTQRRQERADAKWERAKLEQEAIRQTKLSETQTVAVA
ADAVTKIKPPVGPAELLALPNSMSEIKVARPKLATTSILVNGDYMAPPSELSLMEKLAGI
TTETGINGSTTTPQTPASRSRGSSTNSRDGSEKPQKSVRFSPQVESTTFEFSDPPSSKTT
PDGRAELTTPHDDDSPVTATESPKDTLVNKEHLQLTPEEAFFLNFGLGALSITDPYSGLD
MSTMELLRLFREHSYSPPRNGPDADDLQPDDSFLVHYVVYHHFRSLGWVPRAGIKFGVDW
LLYARGPVFDHAEFGLIIVPSYSHSWWKAHWKRAETKSWAWLHSVVRVLSHVTKSLVLVY
VDVPPPPIFDAAITAGLTDALKLYKVREIMVKRWAANRNR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaataaaaatctcgctcccgttgacggcggtgccagaagactctgcgccgcca
aagcccaacggcaaaacagtgcctaaacgcagaggtttgcctttgcatcagatctattcc
ctgcccgtaccgattcggacttttccgctaccagcattctatcccaacaatcccatatcc
ataatccacgtagcgtacgcatggctaaaacagactgtgcgcccaccgcctgcggaaccc
tccatcgtctaccacggcgtgtggtcggaaggcaccaactctgtccacataaccgatgaa
acattcatgaggggcttgtgggaacaaggcttttttggtaaaggtagtctaagtcgaagt
gaaccgagctggctacgtcgcgagctcgtccgcaagggtctcgaagcgacgcacgtcagt
gaaatacacacaacccaaagacgacaagaacgtgccgatgcaaaatgggaacgcgctaag
ctcgagcaagaggccattcgtcaaacaaaactcagcgagacgcaaactgtggctgtcgcg
gcagacgcggtaacaaagattaagcctcctgttggcccggcagagcttctggcacttcct
aactctatgtcagaaatcaaagtggcgaggccgaagctggcgacgacgtcgattctcgta
aatggcgattacatggcgccaccctctgagctttcgctcatggagaagctcgctggtatc
actactgaaaccgggatcaatggttctacgacaactccccagacgccagcatcgcgctct
cgcggcagttcaacaaattcccgagacggttccgagaagcctcaaaagagtgttcgattt
tcaccgcaagtggaatccactacatttgaattctccgatccgccaagttccaaaaccact
cctgacgggcgtgccgagctgacaaccccccatgacgatgactcacccgtgacggcgaca
gagtcccccaaagacactcttgtcaacaaggagcatcttcagctcaccccagaagaggct
ttcttcctcaactttggtctaggggcgctttccatcacggatccatactctgggcttgac
atgtctaccatggagctactgcgcttattccgcgaacactcctattcacccccgcgaaat
ggacccgacgcagacgacttgcaaccagacgatagctttttggtacattatgtcgtgtac
catcactttcgctcgctcggttgggttcctcgcgcgggcatcaaatttggcgtcgactgg
cttctatacgctcgcggccccgtgttcgaccacgctgaatttggcctcatcatcgttcca
tcctactcgcattcctggtggaaagcgcattggaaaagagcggaaacaaaatcttgggcc
tggcttcatagcgtggtgcgagtgctgtcacatgtcaccaagagcctggtgctcgtgtac
gtggacgtcccgcccccgccgatttttgacgcggccatcacagctggcttaacagatgcg
ttgaaactgtacaaagtaagagaaatcatggtcaagcgctgggctgccaacaggaatcgg
tag
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