Chelonia mydas (green sea turtle): 102930236
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Entry
102930236 CDS
T02989
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102930236 (DDX39A)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102930236 (DDX39A)
Spliceosome [BR:
cmy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102930236 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
102930236
NCBI-ProteinID:
XP_037743878
LinkDB
All DBs
Position
20:complement(13560348..13570226)
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AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQVVADAVPPPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVGVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALVR
NKSLNLRSVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaggacgtggagaacgagctgctggattatgaggaggacgaggagccccag
gtggtggcggatgcggtgccccctccagcaaagaaggacgtgaaaggctcctacgtgtcc
atccacagctcgggcttccgggatttcctgctcaaacctgagctactgcgagccatcgtg
gactgtggctttgagcacccgtctgaagtgcagcacgagtgcatcccgcaggccatcctg
ggcatggacgtgctgtgccaggccaagtcgggcatgggcaagacggccgtcttcgtgctg
gccacgctgcagcagatcgagccggtggatggacaggtgtcggtgctggtgatgtgccac
acgcgggagttggcattccagatcagcaaggagtacgaacgcttctccaagtacatgccc
agcgtcaaggtgggggtgttcttcgggggcctgtccatcaagaaggatgaggaggtgctg
aagaagaactgcccccacatcgtggtggggaccccggggcgcatcctggccctggtgcgc
aacaagagcctcaacctgcggagcgtcaagcacttcgtgctggacgagtgcgacaagatg
ctggagcagcttgacatgcggcgggacgtgcaggagatcttccggctgacgccccacgag
aagcagtgcatgatgttcagcgccaccctcagcaaggagatccggccggtgtgccgcaag
ttcatgcaggatcccatggaggtcttcgtggacgacgagaccaagctgacgctgcacggc
ctgcagcagtattatgtcaagctgaaggacagcgagaagaaccgcaagctcttcgacctg
ctcgacgtgctggagttcaaccaggtggtgatcttcgtcaagtcggtgcagcgctgcatg
gccctggcccagctgctggtggagcagaacttcccggccatcgccatccaccggggcatg
tcgcaggaggagaggctgtcccggtaccagcaattcaaggatttccagcgccgcatcctg
gtggccaccaacttgttcgggcgggggatggacatcgagcgtgtcaacatcgtcttcaac
tacgacatgcccgaggactcggacacctacctgcaccgggtggcacgtgccgggcgcttc
ggcaccaagggcctggccatcaccttcgtgtcggacgagggcgacgccaagatcctcaac
gaggtgcaggatcgcttcgaggtgaacgtggcagagctgcctgaggagatcgacatttcc
acgtacattgaacagagccgataa
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