Chelonia mydas (green sea turtle): 102935422
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Entry
102935422 CDS
T02989
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102935422 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102935422 (FIP1L1)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102935422 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
102935422
NCBI-ProteinID:
XP_037753702
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Position
4:complement(90378415..90448609)
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AA seq
630 aa
AA seq
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MSTGEVERLAADLSGTGGDEEEEWLYGDENEPERPEEQKASAPPPSANEEEAAENGVVKT
KVTEAEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGYGTAPVNLNIKTGGRVYGSSGAKVK
GVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKIMAEDNSMEVTPGAEIQDGRYNLFKVQQGRTGNMEKEVAVQLTKAEF
TSPPPLFKSGIPTNSYQMVLKSNSAGNSKNLKAFYHSIVDVTDDGSGNVLSHPVPLFPNS
RNSTSSQSQTSTASRKASSGIGKWQERYGRAESPELRRLSGTIDVIGQTITISRVEGRRR
ANENSNIQVLSERSSGDVDSFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPG
IPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSARAFPFTFPHLAGSAPSWPSLVD
TSKQWDYYARREKDRERERERDRERDRDRDRDRERERTRERERERDHSPTPSVFNSDEER
YRYREYAERGYERHRTSREKEERHRERRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHK
HKKSKRSKEGKEASGEPAPEQETTEAAPVE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggcgaggtggagcggctggcggcggacctgagcgggaccggcggggatgag
gaggaggagtggctctatggcgatgaaaatgaaccagagagaccagaggaacaaaaagct
agtgctccacctccttctgcaaatgaagaggaagctgctgaaaatggtgtagtgaaaacg
aaggtgacagaggctgaggatgacagtgacagtgacagcgatgatgatgaggatgatgtt
catgtcaccataggagatattaaaacaggagctccacagtatggctatggaacagctcct
gtgaatctcaacatcaagacaggaggtcgagtttatggatcttctggtgcaaaagtcaaa
ggagttgatcttgatgcaccaggaagtattaatggtgttccactgctggaagtagattta
gattcttttgaggataaaccttggcgaaaaccaggtgctgatctttcagattatttcaat
tatgggtttaatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatg
ggactcgaaattttaccagttacctcaactacaaataaaattatggccgaagacaattct
atggaagtaacaccaggtgcagagattcaagatggcagatacaatctttttaaggtacag
cagggcagaactggaaatatggagaaggaggtggcagtgcaattgaccaaagctgagttt
acatctcctcccccactgttcaaatcaggaatcccaacaaacagttatcaaatggtcctg
aagagcaattctgctggcaactcaaaaaacctgaaggcattttatcatagtatcgtagac
gttacagatgatggcagtggaaatgtattgagtcatccagtcccactcttccccaattca
agaaacagcacctcttctcagtcacagacaagcactgcttccagaaaagccagttcaggc
atcgggaagtggcaggagcgatatgggagggccgaatcacctgaactaaggagattgtct
ggtacaatagatgtgattggacagaccatcactatcagcagagtggaaggaaggcggcga
gccaatgaaaatagcaacatacaggttctttcagaaagatccagtggtgatgtagacagt
tttaccaagccacctccatttttccctccaggagctccacctacccaccttccaccccct
cctttcctcccaccccctccaactgtcagtactgctcctcctctgattcccccaccaggt
ataccaataactgtgccaccaccaggttttcctcccccacctggaggtccgccaccttct
cttataccaacaatagaaagtggacattcctctggctatgacagccgctctgctcgtgca
tttccgttcacctttccgcaccttgcaggttctgctccttcgtggcctagtcttgtggac
accagcaaacagtgggattattatgcacgaagagagaaagatagggaacgagagagagag
agagaccgagagagggatcgggatcgtgatcgtgatagggaacgagaacgtaccagagag
agagagagggaacgtgatcacagcccaactccaagtgttttcaacagtgatgaagaacga
tacaggtacagagaatatgccgaaagaggctatgagcgtcacagaacaagcagagagaaa
gaggaacgacacagagaaaggagacatagagaaaaagaagagactcgacacaaatcatct
cgaagtaacagcaggcgtcgtcatgacagtgaagaaggggacagccacaggaggcacaaa
cacaaaaaatccaaaagaagcaaagaaggaaaagaagctagtggtgaacctgcccctgaa
caggaaaccactgaagctgctccagtggaatag
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