KEGG   Chelonia mydas (green sea turtle): 102937828Help
Entry
102937828         CDS       T02989                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102937828 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmy03036]
    102937828 (SETDB1)
Enzymes [BR:cmy01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102937828 (SETDB1)
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102937828 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102937828 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DUF5604 SET Tudor_4 TUDOR_5 Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 102937828
NCBI-ProteinID: XP_007068205
LinkDB All DBs
Position
Un
AA seq 1288 aa AA seqDB search
MDSPEVTELQQEVMEELGISMEELQQFIDEELEKFECVKQRKQQLEELEKSVEQKEAEVA
YVDQLFNDASRAIGKCEILVKDLYSKLGLQYRESSSEDEDSASKPMEVIEIPDEDDDDVM
SIDSGWKRSSVFHMTLGNGLVKGGGDENLREAMAAMRKSAQDVQKFMEAVNKKTNAQDLQ
KGVSSALAGSDLSNDGDLVVGMRILGKKRTKTWHKGILIAIQAVGAGKKFKVKFDNKGKS
LLSGNHIAYDYHPSAEKLYVGSRVVAKYKDGNQVWLYAGIVAETPNMKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDVSCRDFIEEYISAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASALEKKQGGQMRTR
PNVGAVRSKGPVVQYTQELTGTSTQFKPIEQIQAMSLAAPSVSPQPAEMESPESQLAQSR
KQVAKKSTSFRPGSVGSGHSSPVSPVLSETPPMGKAAVNQQYRGSYSSGQPGSSAVQPFH
GMMDRVPNEPSYRAPMEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFRRMT
ARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYIFETDCDFLFLEMFCLDPYVLVDRKFQP
YKPFYYIADITKGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVYINTGWEFLVGCDCK
DGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNTNMC
TNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDE
YFANLDHIESVENFKEGYESDAKCSSDSSGVDLKDEEEENTGTEEQDESNEDSSDDNFCK
DEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEVAMTAACKLPVSEET
SKNKVASWLSSNSMSDSFQDNDSASSFKMTEASEVKAGKVEVLGDREKPSTSGLGGKEAF
GLDADSKMQKKEESEEPNKLSLASETGKVYGYNPSPMKLEGIRRPPSKTIMHQSKRHLAP
PQQAADDVLTLSSSTDSEGENGQPAAGQAQGNTNDSDDIQTISSGSEEEDIDDKKNSSSG
LGPIKRQVAVKSTRGFALKSTHGIAIKSTNMASADKGENMLVRKNTRQFYDGEESCYIID
AKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGS
VEGKELLCCCGAIECKKTLSLAMLVPAQ
NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt
atggattctccggaagtaacagagttgcagcaagaagtgatggaagagttggggatctct
atggaagagctccagcaattcattgatgaggagctggagaagtttgagtgtgtgaagcag
cggaaacagcagctggaagagctggaaaagagcgtggaacagaaagaagcagaagtggca
tatgtcgaccagctcttcaatgatgcttcaagagccattggtaaatgcgagatactggta
aaagatctctactccaagctgggccttcagtatcgtgagagcagctctgaagatgaggac
tcagcttccaagccgatggaagtgatcgaaatcccagatgaggatgacgacgatgttatg
agtattgattcgggttggaagcgcagttcagtgttccatatgacgttggggaatgggttg
gtgaagggtgggggagatgaaaatcttcgagaagccatggctgcgatgaggaagtctgcc
caagatgttcagaaatttatggaagctgttaacaaaaaaacaaatgcccaggacctgcaa
aaaggtgtgagctctgcgcttgctgggagtgacctcagcaatgatggtgacctggtggtt
ggtatgcgtatcctaggcaagaaaaggaccaagacgtggcacaaaggaattttgattgca
atccaggcagtaggtgctggtaagaagttcaaagtgaaattcgacaacaaagggaagagt
ttgctttctggcaatcacattgcgtatgactatcatccctctgccgagaaactctacgtc
ggaagccgggttgtggccaaatacaaggatgggaatcaagtctggctctatgctggcatc
gtggccgaaacgccgaacatgaagaataaactgaggttcctgatcttctttgatgatggc
tatgcttcttacgtcactcagtcggaactgtacccgatctgcaggccattaaagaagacc
tgggaagacatagaagacgtttcctgtcgtgatttcatagaggagtacatcagtgcttac
ccaaaccgtcccatggtattactgaagagcggccagctgattaaaacagaatgggaaggg
acctggtggaaatccagagtggaggaagtggatggcagtctggtcaaaatcctcttcctg
gacgacaaacgctgcgaatggatttaccgtggttccacacgtctggagcctatgttcagc
atgaaaacctccacggcctccgctctggaaaagaaacaaggagggcagatgaggactcgt
cccaatgttggtgctgtgaggagcaaagggcctgtagtacagtacacgcaagaattaaca
ggaaccagcactcagtttaaacctatagaacaaatccaagcaatgtctctagctgcaccg
tctgtttccccacagcctgctgagatggaaagccctgaaagtcagctggctcagtccaga
aagcaagtggccaagaaaagcacgtccttccgtcctggctctgtggggtctggacactct
tcgcctgtttctcctgtcctaagtgaaactcctcccatggggaaagctgcagtgaaccag
caatatcgtggaagctattccagtggccagccaggcagcagtgcggtgcagccattccac
ggcatgatggatcgggtgcccaatgagccctcataccgggccccgatggagaagctcttt
tacctgccccacgtctgcagctacacctgcctgtcgcgggtccgccccatccggagcgac
cagtaccgcagcaagaacccccttctcatcccgcttctctacgacttccggcgcatgact
gcccgccgccgcgtcaaccgcaagatgggcttccacgtcatctacaagacgccctgcggg
ctgtgcctgcgcaccatgcaggagattgagcgctatatctttgagacggactgtgacttc
ctcttcctggagatgttctgcctagacccctacgtgctggtggaccgcaagttccagccc
tacaagcccttctactacattgcagacatcaccaaaggcaaggaggacgtgccgctgtcc
tgcgtcaatgagatagacactacccctcctccacaggtggcttatagcaaggagcgcatc
ccggggaaaggagtctatatcaacaccggctgggagttcctcgtgggctgcgactgtaaa
gacggctgccgagacaaatctaaatgtgcctgccaccagctgacagtccaagcaacaggc
tgcacccccggtgggcagatcaaccccaattctggctaccagcacaagaggctggaggaa
tgcctcccgacaggagtctatgaatgtaacaagagatgcaaatgcaacacaaacatgtgc
accaatcgcttggtacaacatggactccaagtcagactccagctattcaagactcagaac
aaaggctggggaatccgctgccttgatgatattgccaagggctcttttgtctgcatctat
gcagggaaaatcctgacggacgactttgccgacaaagaagggctggagatgggggacgag
tacttcgccaacctggatcacattgagagcgtggagaacttcaaggagggctacgaaagc
gatgccaagtgctcctccgacagcagtggcgtggacctgaaggacgaagaggaagagaac
accggcaccgaggagcaggatgagtccaacgaggacagctctgacgacaacttctgcaag
gatgaggatttcagcaccagctcggtgtggcgcagctatgctacccgccggcagacccgg
ggccagaaggagaatggcctgtctgagacagcctccaaggactccggcctcaccaggcag
atcagccacgacgaggtcgccatgaccgccgcctgcaaactgcctgtgtctgaggagacc
tccaaaaacaaagtggcctcatggctgagctccaacagcatgtcggacagcttccaggac
aatgatagcgcctcctcgttcaagatgaccgaggccagcgaggtcaaggcaggcaaagtg
gaagtcctgggtgaccgagagaagccctccacttctgggcttggcggcaaggaggccttt
ggcttggatgcagactcaaagatgcagaagaaggaggaatctgaagagccaaacaagctt
tcgctggcatctgagacaggcaaggtgtatggctataatccaagccctatgaaactcgag
gggatccggaggccaccaagcaagacgatcatgcatcagagcaaaaggcacttggctcct
cctcagcaagcagctgacgatgtgctgacactgtcaagtagcacggacagcgagggggag
aatggccagccggcagcaggacaagcgcagggcaacacgaatgatagtgatgacatccag
acgatttcctctggctccgaggaagaggacatcgatgataaaaagaattcctcttccggg
ctaggtcccattaaaaggcaagtggcagtgaagtccacacgaggttttgccctcaaatcg
actcacgggattgccataaagtcgaccaatatggcatcagctgacaagggggagaacatg
ctcgtgcgcaaaaacacccgccagttttatgacggcgaagagtcctgctatatcattgat
gccaaactcgaagggaacctcggccgttacctcaatcatagctgcagccccaatctgttt
gtgcagaatgtctttgtggacacgcatgatctccgtttcccttgggttgccttcttcgct
agcaagaggatacgagccgggactgagctgacctgggattataactacgaggtgggcagc
gtggagggcaaggaactcctgtgctgctgtggagcgatcgaatgcaaaaaaacgctgtct
ttagccatgctggtgcctgcacagtga

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