Chelonia mydas (green sea turtle): 102940219
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Entry
102940219 CDS
T02989
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04514
Cell adhesion molecules
cmy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102940219 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102940219 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmy03037
]
102940219 (CLDN1)
04147 Exosome [BR:
cmy04147
]
102940219 (CLDN1)
Cilium and associated proteins [BR:
cmy03037
]
Other cilia and associated proteins
Stereociliary proteins
102940219 (CLDN1)
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
102940219 (CLDN1)
Exosomal proteins of colorectal cancer cells
102940219 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
Cytochrom_B_C
TrbC
DUF4134
DUF6336
OppC_N
DUF2613
Motif
Other DBs
NCBI-GeneID:
102940219
NCBI-ProteinID:
XP_027676101
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All DBs
Position
9:3673425..3694565
Genome browser
AA seq
211 aa
AA seq
DB search
MASGGLQLLGFVLASIGWIGIIISAALPQWKMSSYAGDNIVTAQAIYEGLWMSCVMQSTG
QMQCKVYDSLLKLEGSLQATRALMVAGILLGLIAIFVAVTGMKCMKCMEDDEVKKMRMAV
FGGVIFLIAGFAVLVATSWYGHRVAQDFYNPFTPVNTRFEFGQALFIGWAAASLTILGGA
FLCCSCPRREISYPPTRAYPKSAPSAGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggaggtctgcagctgctgggattcgtgcttgcttccataggctggatcggc
atcatcatcagcgcagccctgccccagtggaaaatgtcctcttatgctggggacaacatt
gtgacagctcaagctatctatgagggactctggatgtcctgtgtcatgcagagcacgggg
cagatgcagtgcaaggtgtatgactccctgctcaaactggagggcagtctgcaggctacc
cgggcactgatggtggctggcatactcctgggactcattgccatatttgttgctgtgact
ggcatgaaatgcatgaaatgcatggaggatgacgaggtgaagaagatgcggatggctgtc
tttggcggcgtgatcttccttattgcaggttttgccgtcttggtggccacatcgtggtat
ggacatcgagtggctcaggacttctacaaccctttcacccccgtcaacaccagatttgaa
ttcggacaggccctcttcattggctgggcagcagcttctctcaccattttgggaggcgcc
ttcctctgctgctcctgtccacgaagagaaatttcctacccacccacccgcgcctaccca
aagagtgccccctcagcaggaaaggattatgtataa
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