KEGG   Chelonia mydas (green sea turtle): 102941994
Entry
102941994         CDS       T02989                                 
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03440  Homologous recombination
cmy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102941994 (TOP3B)
   03460 Fanconi anemia pathway
    102941994 (TOP3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmy03032]
    102941994 (TOP3B)
   03400 DNA repair and recombination proteins [BR:cmy03400]
    102941994 (TOP3B)
Enzymes [BR:cmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     102941994 (TOP3B)
DNA replication proteins [BR:cmy03032]
 Eukaryotic type
  DNA Topoisomerases
   102941994 (TOP3B)
DNA repair and recombination proteins [BR:cmy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     102941994 (TOP3B)
   FA (Fanconi anemia) pathway
     102941994 (TOP3B)
SSDB
Motif
Pfam: Topoisom_bac Toprim DUF2204
Other DBs
NCBI-GeneID: 102941994
NCBI-ProteinID: XP_037734520
LinkDB
Position
15:15390562..15418099
AA seq 862 aa
MKTVFMIAEKPSLAQSIAKILSRGNMTSHKGLNGACSVHEYTGSFIGQSVHFKMTSVCGH
VMTLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTEKTVYRAKFSSITDTDICNAMNSLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNHEKESSLTLEWDRVRVFDREIAQMFLNITKMAREAKVESVSKKEKAKQRPLA
LNTVEMLRVASAALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKEPLRQQANN
PYWAETVKALLSEGVNRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATL
CADCKYLQTTISFIIGPEHFTCVGKMVISPGFTEIMPWQSIPLEESLPNCEKGDVFPVSE
VKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANYQQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDPTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCESCDAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAATRHPMHRGGQGKRQGRGRGKGRR
PGGRPNPKRPKDKMAALAAYFV
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgaagaccgtgtttatgattgcagagaagccttctctggctcagtctatagccaagatc
ctctcaagaggaaacatgacctcccataaagggctgaatggagcatgctctgtacatgag
tacactggatcattcatagggcagagtgtccacttcaaaatgacatctgtgtgtggtcat
gtgatgactctggatttcataggaaaatataacaattgggacaaagtggatccagcagaa
ctttttagcaaagcccctacagaaaagaaagaagctaaccccaaattgactatggtgaaa
tttttacaggtggaaggaagaggctgtgactacattgttttatggttggattgtgataag
gagggggaaaacatctgttttgaggttcttgatgctgttcttcctgttatgaataaacct
cgtggcactgaaaagacagtttacagagcaaagttcagttccattactgacacagacatc
tgcaatgctatgaactccctgggagaacccaatcgaaatgaggctctgtcagtggatgcc
cgccaggagctggatctgagaattggctgcgcatttacaaggtttcagactaaatatttt
caggggaaatacggcaatttagacagctcactcatctcctttgggccatgtcagaccccg
acacttggattctgtgtagaaagacatgataaaatccagtctttcaaacctgaaacttat
tgggtgctgcaagccaaggtaaaccatgaaaaagaaagttctctcactttggagtgggat
agagtcagggtattcgatcgggagattgctcaaatgttcctaaacataaccaagatggca
agagaagcaaaggtagaatctgtgagtaagaaggagaaagcaaagcagagaccactggcg
ctgaacacagtagaaatgttacgagttgccagcgctgctttgggaatgggtccacaacat
actatgcaaatagcagaacgactttatactcagggttatattagctaccctcgaacagaa
acaacccactatccagaaaactttgacttgaaagaacctttgagacagcaggctaataac
ccttactgggcagaaacagtaaaggcattgctgtcagaaggtgttaatcgtccaaggaaa
ggccatgatgcaggagaccatcctccaattactccaatgagagctgcaacagaagcagaa
ctaggtggtgatggatggcgattgtatgaatatatcactagacatttcattgccactctc
tgcgctgattgcaaatatctccaaaccaccatttcttttattattggccctgaacatttt
acctgtgtaggaaagatggttatttcaccagggttcactgagattatgccctggcaaagc
atcccgttagaggagagcctccccaactgtgagaagggagatgttttcccagtcagtgaa
gtaaaactgctggagaaacaaaccaatcctcctgattacttgactgaagcagaactcatt
actctgatggagaaacatggcattggaactgatgcaagtatcccagttcacattaacaat
atctgccagcggaactatgtcacagtggagagtggtcgcagattaaaacctacaaacctt
ggcattgttctggttcatggttactacaaaatagatgccgagctggtgcttcctacaatc
cgcagtgcagtagagaagcaactcaacttgatagctcaagggaaagcaaactatcagcag
gttctggagcacacccttgatatcttcaaaaggaagtttcactactttgttgattctatt
gcaggtatggatgaattgatggaagtgtctttttcaccgttagctgccacaggcaaacct
ctttctcgctgtggcaaatgccatcgttttatgaagtacatccaggccaagccaagccgt
ctgcactgttctcattgtgatgaaacatacagccttccccagaatggcaccatcaaactc
tacaaagagctgcgttgccccctggatgactttgagctggtgctgtggtcttccggatcc
agaggaaagagctacccactatgtccatactgttacaaccatccacccttcagggacatg
aaaaaagggatgggctgcaatgagtgtactcacccaacatgccagcactcacttagcatg
cttggaatcgggcagtgtgtggaatgcgagaacggggttctggtgctagacccaacgtca
ggtcccaagtggaagatggcctgcaacaaatgcaatgtgattgtgcatttctttgagaat
gcccacaaggtgcgagtgtcaccagagacctgcgagtcgtgtgatgcggcccttgtggat
gtggattttaataaagctaagtctcccctccctggtgacgagacacagcattcaggctgt
gtcttctgtgaccctgtgttccaggacctggtggagcttaagcacgcagccacgaggcac
cctatgcaccgtggaggacaggggaaaaggcagggtcgaggaagaggaaagggcaggaga
cctggagggagacccaacccaaagagacccaaggacaaaatggcagctctggctgcatac
tttgtataa

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