Chelonia mydas (green sea turtle): 102941994
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Entry
102941994 CDS
T02989
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03440
Homologous recombination
cmy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102941994 (TOP3B)
03460 Fanconi anemia pathway
102941994 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmy03032
]
102941994 (TOP3B)
03400 DNA repair and recombination proteins [BR:
cmy03400
]
102941994 (TOP3B)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
102941994 (TOP3B)
DNA replication proteins [BR:
cmy03032
]
Eukaryotic type
DNA Topoisomerases
102941994 (TOP3B)
DNA repair and recombination proteins [BR:
cmy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102941994 (TOP3B)
FA (Fanconi anemia) pathway
102941994 (TOP3B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF2204
Motif
Other DBs
NCBI-GeneID:
102941994
NCBI-ProteinID:
XP_037734520
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Position
15:15390562..15418099
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AA seq
862 aa
AA seq
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MKTVFMIAEKPSLAQSIAKILSRGNMTSHKGLNGACSVHEYTGSFIGQSVHFKMTSVCGH
VMTLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTEKTVYRAKFSSITDTDICNAMNSLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNHEKESSLTLEWDRVRVFDREIAQMFLNITKMAREAKVESVSKKEKAKQRPLA
LNTVEMLRVASAALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKEPLRQQANN
PYWAETVKALLSEGVNRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATL
CADCKYLQTTISFIIGPEHFTCVGKMVISPGFTEIMPWQSIPLEESLPNCEKGDVFPVSE
VKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANYQQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDPTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCESCDAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAATRHPMHRGGQGKRQGRGRGKGRR
PGGRPNPKRPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtgtttatgattgcagagaagccttctctggctcagtctatagccaagatc
ctctcaagaggaaacatgacctcccataaagggctgaatggagcatgctctgtacatgag
tacactggatcattcatagggcagagtgtccacttcaaaatgacatctgtgtgtggtcat
gtgatgactctggatttcataggaaaatataacaattgggacaaagtggatccagcagaa
ctttttagcaaagcccctacagaaaagaaagaagctaaccccaaattgactatggtgaaa
tttttacaggtggaaggaagaggctgtgactacattgttttatggttggattgtgataag
gagggggaaaacatctgttttgaggttcttgatgctgttcttcctgttatgaataaacct
cgtggcactgaaaagacagtttacagagcaaagttcagttccattactgacacagacatc
tgcaatgctatgaactccctgggagaacccaatcgaaatgaggctctgtcagtggatgcc
cgccaggagctggatctgagaattggctgcgcatttacaaggtttcagactaaatatttt
caggggaaatacggcaatttagacagctcactcatctcctttgggccatgtcagaccccg
acacttggattctgtgtagaaagacatgataaaatccagtctttcaaacctgaaacttat
tgggtgctgcaagccaaggtaaaccatgaaaaagaaagttctctcactttggagtgggat
agagtcagggtattcgatcgggagattgctcaaatgttcctaaacataaccaagatggca
agagaagcaaaggtagaatctgtgagtaagaaggagaaagcaaagcagagaccactggcg
ctgaacacagtagaaatgttacgagttgccagcgctgctttgggaatgggtccacaacat
actatgcaaatagcagaacgactttatactcagggttatattagctaccctcgaacagaa
acaacccactatccagaaaactttgacttgaaagaacctttgagacagcaggctaataac
ccttactgggcagaaacagtaaaggcattgctgtcagaaggtgttaatcgtccaaggaaa
ggccatgatgcaggagaccatcctccaattactccaatgagagctgcaacagaagcagaa
ctaggtggtgatggatggcgattgtatgaatatatcactagacatttcattgccactctc
tgcgctgattgcaaatatctccaaaccaccatttcttttattattggccctgaacatttt
acctgtgtaggaaagatggttatttcaccagggttcactgagattatgccctggcaaagc
atcccgttagaggagagcctccccaactgtgagaagggagatgttttcccagtcagtgaa
gtaaaactgctggagaaacaaaccaatcctcctgattacttgactgaagcagaactcatt
actctgatggagaaacatggcattggaactgatgcaagtatcccagttcacattaacaat
atctgccagcggaactatgtcacagtggagagtggtcgcagattaaaacctacaaacctt
ggcattgttctggttcatggttactacaaaatagatgccgagctggtgcttcctacaatc
cgcagtgcagtagagaagcaactcaacttgatagctcaagggaaagcaaactatcagcag
gttctggagcacacccttgatatcttcaaaaggaagtttcactactttgttgattctatt
gcaggtatggatgaattgatggaagtgtctttttcaccgttagctgccacaggcaaacct
ctttctcgctgtggcaaatgccatcgttttatgaagtacatccaggccaagccaagccgt
ctgcactgttctcattgtgatgaaacatacagccttccccagaatggcaccatcaaactc
tacaaagagctgcgttgccccctggatgactttgagctggtgctgtggtcttccggatcc
agaggaaagagctacccactatgtccatactgttacaaccatccacccttcagggacatg
aaaaaagggatgggctgcaatgagtgtactcacccaacatgccagcactcacttagcatg
cttggaatcgggcagtgtgtggaatgcgagaacggggttctggtgctagacccaacgtca
ggtcccaagtggaagatggcctgcaacaaatgcaatgtgattgtgcatttctttgagaat
gcccacaaggtgcgagtgtcaccagagacctgcgagtcgtgtgatgcggcccttgtggat
gtggattttaataaagctaagtctcccctccctggtgacgagacacagcattcaggctgt
gtcttctgtgaccctgtgttccaggacctggtggagcttaagcacgcagccacgaggcac
cctatgcaccgtggaggacaggggaaaaggcagggtcgaggaagaggaaagggcaggaga
cctggagggagacccaacccaaagagacccaaggacaaaatggcagctctggctgcatac
tttgtataa
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