Chelonia mydas (green sea turtle): 102942517
Help
Entry
102942517 CDS
T02989
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00260
Glycine, serine and threonine metabolism
cmy00630
Glyoxylate and dicarboxylate metabolism
cmy00670
One carbon pool by folate
cmy01100
Metabolic pathways
cmy01200
Carbon metabolism
cmy01230
Biosynthesis of amino acids
cmy01240
Biosynthesis of cofactors
Module
cmy_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102942517 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102942517 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102942517 (SHMT1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102942517 (SHMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
102942517
NCBI-ProteinID:
XP_043380190
LinkDB
All DBs
Position
10:7014140..7029147
Genome browser
AA seq
486 aa
AA seq
DB search
MAHLTNVNAELPTAELWVSHNKMVVEPLDASDPEVYDLIKKEKRRQRLGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELEILCQKRALEAYRLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPNT
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADENGAYLLADMAHISGLVAA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGARSVDPKTGKEIPYNLESPINQAVFP
GLQGGPHNHAIAGIAVTLKQAMTPEFKAYQRQVVANCQALSATMAALGYHIVTGGSDNHL
ILVDLRNRGTDGGRAERVLEVCSIACNKNTCPGDKSALRPSGLRLGTPALTSRGFREEDF
QKVAHFIHKGIELTLKIQNDMSPKATLKEFKERLVSDGKYQAGLKSLKEEVETFAAAFPL
PGLPVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctcacttaaccaatgtcaatgcagagctccccactgctgaactctgggtgtcccat
aacaagatggtcgtggagccgcttgatgccagtgacccagaggtgtacgacctcatcaag
aaagagaagcggcgccagaggcttgggttggagctgattgcgtccgagaactttgcaagt
cgagcggttctggaggccctgggctcctgcatgaacaataaatactcggaagggtacccg
ggacagaggtactatggcgggacagagtttgtggatgagctggagatcctctgccagaag
agagctctggaggcttacaggctggacccacagaaatggggggtcaatgtccagccatac
tcaggctcccccgctaactttgcggtgtacacggccctggtggagccccatggcaggatc
atgggtctggacttgcctgatggggggcacctgacacatggcttcatgacggacaagaag
aaaatctcagctacctcaatcttctttgaatccatgccctacaaggtcaatcccaacact
ggctatatcgactacgaccggctggaggagaacgcccgtttattccacccaaagttgatc
atagcaggcgtcagctgttactcgcgtaacctggactacgcccgcatgaggaagatcgcg
gatgagaacggagcttacctcctggccgacatggcccacatcagcggcttggtggcagcc
ggtgtggtgccgtcgccatttgaacactgtgacgttgtgtcgaccacgactcacaagacg
ctgagaggctgccgggccggcatgatcttctataggaaaggagctcgcagcgtggatccc
aagactggcaaggaaattccatacaacctggaaagccccatcaaccaggccgtcttccca
gggcttcagggagggcctcacaaccatgccattgcaggaatcgctgtcactttgaagcaa
gccatgaccccggaattcaaagcctatcaacggcaggttgtcgcaaactgccaggcactg
tctgccactatggcggcactgggctaccatatcgtcactggtgggtctgacaaccacttg
atcctcgtggacctgcgcaacagagggacggatggcgggagggctgagcgggtgctggaa
gtctgttccatcgcctgtaacaagaacacctgtcctggtgacaagagtgccttgcgccca
agcggcctgaggcttgggacaccagctttgacctcccggggattccgggaagaggacttc
caaaaagtagctcatttcatccacaaagggatagagctgacgctgaagattcagaacgac
atgagccccaaagcgacgctgaaggaattcaaggagaggctggtgagcgatgggaagtac
caggcgggtctcaagtctctgaaagaggaggtggagacctttgctgctgccttcccactc
cctggcctgcctgtcctttaa
DBGET
integrated database retrieval system
