Chelonia mydas (green sea turtle): 102944830
Help
Entry
102944830 CDS
T02989
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102944830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102944830
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102944830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
102944830
NCBI-ProteinID:
XP_037764345
LinkDB
All DBs
Position
9:80314535..80348939
Genome browser
AA seq
571 aa
AA seq
DB search
MATELEPPASGAAPLEAEEDEEHWLYGDDTTGKQEDGPIAGHAESSHPLQDAPQESRPVT
SEDREMSQHAPPSGEDEEEDSDSDSDDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGY
GTSSSAKLQPKGIDLDATGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWK
AYCEKQRRLQLGLDPSPPISSENKITVQQGRTGNSEKEPENNIIKTEFKTDFVALIGGRM
KAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGNKPQPPQQPQQ
PSQPQQPPQQQPFVPPAGPPPPPIAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGL
FPPPLAPPPALLIPTLDGQPAGYNNRQPPPFGYSSADSGFISYPPISTSHTPWVTTVDKG
TSSSSSSHWEYSSSRRERERERERERERDRDRTPTTSEYNNSSPCLTVRLSLPQSDDERY
RYYSRERGYDFERDYRRSRDRSREREDRHRERRHREKEESSKHKSSRRKQHESEEGESHR
RHKHKKNKRSKEEKEASDDGVAEGDEQDAKE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccccctgcctcgggcgcggcgccgctggaggcggaggaggac
gaggagcactggttgtacggggatgacaccactggtaagcaagaagatggaccaattgct
ggacatgcagaatcttctcatcctttgcaagatgctcctcaggagagccggcctgtcacc
agtgaagaccgagagatgtctcaacatgcccctccaagtggtgaagatgaggaggaagac
agtgatagcgacagtgatgatgatgatgatgtgaaagttaccattggcaacattaaaaca
ggagcaccatcatacatggggactcctatgaatctgaacttaaaaacaggtagaggctat
gggacatcctcttcagccaagttgcagcccaaaggtattgatctagatgccacagggaat
ataaatggattgcctgtaatagaagtggatttagattcgtttgaagacaaaccgtggagg
aaaccaggtgctgacctttcggattactttaattatggattcaatgaagaaacgtggaaa
gcttattgtgaaaaacagcgacggcttcagcttggactggatccctctccacctatcagc
agtgagaataagatcacagttcagcaaggaaggacaggaaattcagagaaagaaccagag
aacaacattatcaaaacggaattcaaaacggattttgtggctctgataggaggacggatg
aaggccgggcctccaccaaataggaagctgggtgggacaattgatgtgattggtggacag
gcaggcactattaggagggtagaaggaagacgccgcgataaacacgcttcagaggaaaat
cccattcaggttcttggagatcatggaaataagccacaacccccacagcagccccagcaa
ccgtcacagccccagcagccacctcagcaacagccgtttgtaccaccagcaggtccccca
cctcccccaattgctgggccacccccaccacactttctgcaccctccccctccagttact
tctgtcccacctcctctgcatcctccaggcttgccaccaccaggtcccattccagggctg
ttccctccacctctggctcctccaccagctcttctcattccaacacttgatggccaacct
gccggctacaataacaggcagcctccaccatttggatacagctctgcagattctggtttc
atcagctaccctcctatttccacgtctcacacgccctgggtgacgacagtggataagggc
acaagcagctccagcagcagccactgggagtactccagctcaaggcgtgagagagaaagg
gagcgggaaagggaaagggagagagacagagaccggactccaaccaccagtgaatacaac
aacagctccccctgcctcacggtacgcttgtctctcccccaaagcgacgacgagcgatat
cgctactacagtcgagagcgaggttatgattttgagcgggattatcgcaggagtagagat
cggagcagagagcgggaggatcgccaccgggagcgcaggcacagagagaaggaggagagc
agtaaacataagtcttcaagacgtaagcagcacgagagtgaagagggtgaaagccaccgg
cgccacaagcacaaaaagaacaagcgcagcaaagaggagaaggaggccagtgatgacggc
gtcgcagagggagatgaacaagatgctaaggagtaa
DBGET
integrated database retrieval system
