Cupriavidus necator N-1: CNE_1c28190
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Entry
CNE_1c28190 CDS
T01564
Symbol
rfaL
Name
(GenBank) membrane spanning protein involved in lipopolysaccharide biosynthesis
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc00540
Lipopolysaccharide biosynthesis
cnc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CNE_1c28190 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cnc01005
]
CNE_1c28190 (rfaL)
Enzymes [BR:
cnc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
CNE_1c28190 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
cnc01005
]
Core region
CNE_1c28190 (rfaL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AEI78132
UniProt:
G0ETT3
LinkDB
All DBs
Position
1:2919207..2920496
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AA seq
429 aa
AA seq
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MLLMTRLQRSQSYGVDKALYLAACAVLAAFPALMFVKPTVSNLCYGLLLGWSAITLVAGG
RAGRAECGALLRRYWLFMLAMAALPLAVLLQQLLAGAEEPHVSYLYLRFALFIPLVFGMV
RLGRGGMRSVQWGFVVCALLSAAWIHEATAAGRPAHVGFSNIIPLSNLSMLMGILALISI
GWDRPRGYLQSGLKLLAGSAGLYASYTSGTRGGWLAIPVLALIALAASRRLTRVHKVAAL
AGLAGLMVLTWFGSPFVQQRTTDVVSELSQFDHHVTLDTSIGIRLQLWRTSLQMVQAHPW
TGVGPDNYEQALQALAAQHVITAEAATMPHTHNDILHAAATLGIPGLLAVLMLYLVPAAF
FLRHLRNDDRDTQVASAMGLALCCGFMVFGLTEVMFATTLVNAFYSLIMAVCFAYVVARK
DALPAQAAS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgatgacgagattgcagagatcccaatcgtatggggtcgacaaagctctgtac
ctggccgcctgtgccgtcctggctgcgttccctgcgctgatgtttgtcaagccgacggtt
agcaacctctgctacggactcctgctcggctggagcgccatcactctcgttgccggcggg
cgcgcgggccgggcggaatgtggcgcgctgctgcgccgatactggctgttcatgctggcc
atggcggcgctgccgcttgcggtgctgttgcagcaactgctggccggggcggaggagccg
catgtttcttacctgtacctgcgctttgcattgttcattccgttggtttttgggatggta
cggcttggcaggggtgggatgcggagtgtgcagtggggtttcgtggtctgcgcactcctt
tccgccgcttggatccacgaggcgacagctgccggtcgcccagctcacgtagggttctcc
aatatcattccccttagcaatctgtccatgctgatgggaattctcgccctgatttcaatt
ggatgggatcgccccaggggctatctgcagtcgggcctgaagctgctggccggctctgct
ggcctgtacgcctcatacaccagcggcacgcgtggcggctggctcgcaatccccgtgctg
gcgctgattgcgttggcagcatcacgcagattgacccgcgtacacaaggtggccgcactg
gctggactggctggtctcatggtcctcacgtggttcggcagcccctttgtgcagcagcgc
acgacagacgttgtatccgaactgtctcaatttgatcaccatgtaacactggacacgtcg
atcgggatacggctacagctgtggcgaacatcgctccagatggtgcaggcccatccctgg
accggcgtggggccggacaactatgaacaggctctgcaggccctggcggcacagcacgtg
attaccgctgaggccgccaccatgccgcacacccacaatgacatcctgcacgcggcggcc
acactcggcataccagggctgctggcagtgctcatgctgtatcttgtgccagccgccttc
ttcctgcgccacctgcgcaatgacgatcgggatacacaagtcgccagcgccatgggccta
gccctgtgctgcggcttcatggtgttcggcctgaccgaggtcatgttcgccacgaccctg
gtcaatgccttctacagcctgatcatggccgtgtgcttcgcctacgtggttgcgcgcaag
gacgccttgcccgcgcaggcggccagttga
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