Cryptococcus neoformans var. neoformans JEC21: CNA05480
Help
Entry
CNA05480 CDS
T00243
Name
(RefSeq) DNA ligase, putative
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
DNA_ligase_A_C
CAF1-p150_N
Motif
Other DBs
NCBI-GeneID:
3253216
NCBI-ProteinID:
XP_566872
UniProt:
Q5KNS4
LinkDB
All DBs
Position
1:join(1469506..1470185,1470253..1470664,1470725..1470742,1470793..1471301,1471366..1471684,1471742..1472132,1472189..1472341,1472394..1472556,1472607..1472796)
Genome browser
AA seq
944 aa
AA seq
DB search
MPADSKVKRGAKPQATPITPPSKKFKQAAVTQQRPISSFFHSPVKSSIKGKEVIIIEDSD
SDDYPESSTQAAIAHDGNGDVESSRNHVLQLPEENQISSLSCVKEKDGHGMASTSKVFHE
RSKTTPNGTAISSRTEGQSDRVHYFSRKSQRTITGDEPVPPSSITTCASEDSVQNIDFDR
DPLAFDPSRVIATSWPKGRLPYSILVSVYVQLSSTKSRLAIVRILTNFLHLLMHTSPPDL
TPCLYLLSNHLTPSYIHCDLGIGSSILSKSIQEISGLQARDLKHLWQKYGDPGDVAFEAK
NKLRTLVQPAPLLAGEVYDKLLEIAKVKGSNSGKIKNELVRKLLIRAKGEEVRFLVRSIV
GNLRIGAVRLTLLTALARATTITRLPADLKQSIIPLPRATANDGRNDKRSVITKAPPDVA
RDSAETLCLDAIRIVRKVYVRHPNYEDLVAGLKEGVESLEDKVPVSVGIPLSPMLGSITR
SLNEVFTRLGHLSFTAEAKLDGQRGQLHIRLDGPEGKDDGGGRWVYADNGTKVWVRLFSR
HLEDMTDKYPDICHLALDLLSRPLATERPPFPAVSSRPFSRVIDLLHINNITSVVMDTEI
VALDKDTGNFRTFQELSNRAKKDVKMEEIKVIVGVFAFDLMVLNDVSLLDVPFSHRRHLL
HSLLPPFAPNSNEVGHPVARFTHVEYIDSVHLTDPEAELQAFFERVVEKKCEGLMVKLLE
NGEGLAGEEATEDSLGQEGGLEVKSEQKNGSKSKRQPLPATYEPDQRSQGWLKVKKDYLE
GLGDSLDLVPIGAWWGQGRKAGWWSPILLACHNPDSGALEAVCKCMSGFSDAFYKDLSKR
YPAEGMPSKCSKIAPIGFVNTNGLIPDVWFEPSEVWEIKGADITLSPVYPAASSHLGSER
GLSVRFPRFIRMRDDKTWEDAMTSDQLADMYRRQIKEGEKTTKN
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgacagcaaagtcaaaaggggagcgaaaccacaggcaacacccatcacaccg
cccagtaagaaattcaagcaagcggctgtcacccaacaacgtcccatatcctcttttttt
cactcacctgttaaaagcagcatcaagggcaaggaggtcattatcatagaagattcagat
tcagatgattatcctgagtcctcaacccaggcggcgatagcacatgacgggaatggtgat
gtggaatcatccagaaaccatgttcttcaactacctgaagagaatcagataagctccctc
agctgtgtaaaggagaaagatggacatggtatggccagtacttcaaaagtttttcatgaa
agatcgaagacaacgcccaatgggacggctatctcgtcacgaacggaaggacaaagtgat
cgagtgcactacttctcccgaaaatcccagagaacaataactggggacgaacctgttcct
ccctccagtatcactacttgtgcttcagaagactcggttcaaaatatagattttgatcgc
gaccctctcgccttcgatccgtcccgggttatagcaacttcctggcccaagggtcgttta
ccgtacagtattctcgtcagcgtgtatgtacagctctccagtacaaagtcgcgattagct
atcgtacgaatcttaacaaacttccttcatttgctcatgcacacttcaccacctgatttg
acaccttgcctttatctcctttccaatcaccttaccccttcctacatccattgtgatctt
ggcattggatcttctatattgtccaaaagtatacaagaaatttcgggccttcaagctcgc
gatctcaaacacctatggcaaaaatatggcgatcctggcgatgttgctttcgaagcgaaa
aacaaactacgaactttggtgcaaccagctccgcttttggctggagaagtgtatgataag
ttgctggaaattgcgaaagtgaagggcagtaatagcgggaaaataaaaaatgagctagtc
agaaagttgttgattcgggccaaaggagaggaagtcagatttcttgtccgaagtatagta
ggcaacttgaggataggtgccgtcaggctgacccttctgaccgccttggcacgcgccacc
actataacacggcttccagctgaccttaagcagtctataataccccttccaagggctaca
gccaacgatggcaggaatgataaacgctcagtcattactaaagcacctccagacgttgcc
cgcgattccgcagagactctctgtctagatgccatacgcatagtacggaaagtgtatgta
cgacatccaaattacgaagatcttgtagccggcctcaaggaaggagttgaaagtttggag
gataaagtgcctgtgagcgtagggattccactgtctcccatgctggggtccatcacaaga
tcactgaacgaggtgttcacgagactgggacatctttcgtttacagcagaggcgaagtta
gatggtcagagaggacaacttcatatcagactggatggcccggaaggaaaagatgatgga
ggggggagatgggtttatgcggataatggtactaaagtttgggttaggctattcagcagg
cacttggaagacatgaccgacaagtaccccgatatctgtcacctagctcttgatcttctc
tcgcgaccccttgcaacagaaaggccgccattcccagccgtttccagtcgaccattttca
agagtcatcgatttactacacatcaataatatcacatcagtggttatggataccgagatt
gtagcactggacaaggataccggtaactttcgaacctttcaagaactgtctaacagagcg
aaaaaagacgtgaaaatggaggaaattaaagttatagttggggtctttgcttttgattta
atggtgctcaatgatgtctcattactggacgtccctttttcacatcggagacatctcctt
cacagtctgctcccccctttcgctcccaattcaaatgaagttggacacccagtggcacgt
ttcacacatgtcgaatacattgattctgtccatctcactgatcctgaggcggaattgcaa
gcattcttcgagagggttgtggaaaaaaagtgcgaaggcttgatggtcaaattgctggaa
aacggggaaggcttggctggggaagaggcgacagaagatagtttaggtcaagaagggggc
ctggaagttaagtcggagcagaagaatgggagtaagagtaagcgtcaacctcttcccgct
acatacgagccagatcagcgcagtcaaggttggctcaaggtaaagaaagattatctagaa
gggttaggggattctctcgatctcgtgcccattggcgcgtggtggggtcagggccgtaaa
gcgggttggtggagtcctattctcttagcctgccacaatcctgatagtggcgccctggaa
gcggtctgcaaatgcatgtccgggttttctgacgcattctacaaagatcttagcaagcgc
tatcctgccgaaggaatgccgagtaaatgcagcaaaatagcacctattggatttgtaaat
acgaacggcttaataccagacgtgtggtttgagcctagcgaagtatgggagattaaaggt
gctgacatcaccctctctccggtctatccggcggcttcatcgcatcttggatctgaaaga
gggttgagtgtccgattccctcgtttcatacgcatgcgagacgacaagacatgggaggac
gctatgacaagtgatcagcttgccgatatgtacagacgccagataaaagaaggcgagaag
acaaccaaaaactag
DBGET
integrated database retrieval system