KEGG   Cryptococcus neoformans var. neoformans JEC21: CNN01100
Entry
CNN01100          CDS       T00243                                 
Name
(RefSeq) telomere maintenance protein, putative
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03440  Homologous recombination
cne03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CNN01100
   03450 Non-homologous end-joining
    CNN01100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cne03032]
    CNN01100
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNN01100
DNA replication proteins [BR:cne03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    CNN01100
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     CNN01100
    BRCA1-C complex
     CNN01100
   NHEJ (non-homologous end-joining)
    MRX complex
     CNN01100
SSDB
Motif
Pfam: AAA_23 AAA_21 SMC_N AAA_15 SbcC_Walker_B AAA_29 ABC_tran AAA_13 Roc DUF3502 DUF1843 YqaH AAA_16 GTP_EFTU Rot1 AAA_22
Other DBs
NCBI-GeneID: 3255429
NCBI-ProteinID: XP_024514047
LinkDB
Position
14:join(337523..337524,337577..337697,337748..337831,337886..338062,338121..338296,338350..338464,338516..338741,338797..338975,339028..339198,339251..339355,339413..339726,339774..339872,339924..340051,340103..340238,340290..340419,340477..340904,340961..341162,341219..341388,341442..341763,341823..341998,342054..342353,342400..342456,342506..342613,342674..342737)
AA seq 1329 aa
MASLNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKTTIIECLKYATTGDMPPNTK
GGAFVHDPKMAGEKEVKAQVRLRFWNAKRERMTATRNLQVTTKKTGQLTMKTLEGILAKT
DVGDSSGKRNTISTKCSEMDEEVPYLLGVSRAILENVIFCHQEESNWPLSEPAALKKKFD
DIFEATKYTKALDNIKTLRKERMAELKVDKERLKFLKADKDKAERLRKDLEESISQENRK
QTELDNLKERYETIKIRNAEFYEEATHFRQIYEQSKSLKEKKKMYEDNRKHSKLNMQEMD
ESTEELLHMQQNFDAHLRTLTMQRSEKEDAKEKEESELEDLRVKERNLANRQGGLVAHRQ
TYERNLREREAAIRQIAKAHDLVGYDYSPLEDSKVAEFVDKIYEMVRKAENDLKKLQTEN
SRKERELQEELDRLSTMKTSAQATKKSKEEQIIRLTEKIRTSEATFHSISNPSVELELNQ
NKLTELEADLSKFQAEITDAKYDEKINQKGLLIRQKELERDNINAELAVLNRKADSRAKL
DLQRNELEGKNSQISTLLKTHEAKFRELVEVDIHDVKPEDIEDKVIGAISRKDRDLIQEE
NNASALNRDHSQVQASLSRAREELAIKKREIHNMQREIEAAIYNVNQPAEEEEVPAEEAK
NLAEAFDICRSEIESVQRAIMDKQGSRVVWEGLLTTVKAGGVCEACNRGIKHEEKNAVTR
HMEAKIRQLMEAEQAGVDAEIEVEKSWTEILDALIRVEPHEAKIQDLQRRVIPRLETQIK
EGEEKLRSLVKEVDDSKTSIQKLKSASRDLQNLKATASYINRLYIETGDLKANVKRLQTE
LESSGSSKTVEEVQKEVDRVSQEIKTLSREQQAFSSEKELKVNALRATQDEIGRKSLHIG
RLKAQQDKRKMEEEALSDMQNTLGTLHDELQDLDQTVQAAEAPWKEKNETLGRFRTERAN
AEKEASTQVRMYQSSLGEIEGKHKACQAYVAEGNDRKIRENEAAMSEIKRQISQSNDARA
ALEAEISALSSELSKSESLKANIRSNLKYREDGKKIEMVQAELDELDLDSAAESRAKFNK
EYKGMLDEETEAQGLMAITQGGLLEMRTNRQKMEKTLKTDYKNIDKEHKEQLIKTTISEY
ANNDLEKYGKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEASTST
RKSYNYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLD
QENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRDASQKSV
LERQRVGRG
NT seq 3990 nt   +upstreamnt  +downstreamnt
atggcatctctcaataagcttgccattcgaggcatccgttctttcgatgacaagcatgtc
caagtcatagaattctattcaccacttactgtaattgttggacacaatggtagtggcaag
actacaatcatcgagtgcttgaaatacgctaccaccggtgacatgccgcccaatactaag
ggcggagccttcgttcatgacccaaagatggctggtgagaaggaagtcaaggctcaagtc
cgtttgagattctggaatgccaagcgggagcgtatgacggcaactcgaaatttacaagtg
acgacgaagaagactggtcaattgaccatgaagacgctggaaggtatactggctaagacg
gatgttggtgattcaagtgggaagagaaataccatctctacgaaatgttcagaaatggat
gaagaagttccatacttgttgggcgtgtcgagggccattcttgagaatgtgatcttctgt
catcaagaagagtccaattggccgctttctgaaccggccgcattaaaaaagaaatttgac
gacatcttcgaagctaccaagtatacgaaagctttggacaatattaaaactttaagaaaa
gaacgaatggccgagctcaaagttgacaaggagagactcaagttcctcaaggctgacaag
gacaaggctgagcgtttgcgcaaggatttggaagagtcaatttcccaagaaaaccgtaaa
caaacagaactcgacaacctcaaagaacgatatgaaactatcaagattcgtaacgccgaa
ttttacgaggaagcaacacatttccgacaaatctatgaacagtcgaagtcgttgaaggag
aaaaagaagatgtatgaggacaaccgaaagcattcaaagttgaatatgcaagagatggat
gaatcgactgaggaactcctccatatgcagcaaaacttcgacgcccaccttcgaaccctt
accatgcagcgatcagaaaaggaggatgcgaaagagaaggaggaatctgagttggaggac
cttcgtgtaaaggagaggaatcttgctaataggcagggtgggctggttgctcatcgtcaa
acgtacgagcgtaatttgagagagcgtgaagctgcgataaggcagatcgctaaggctcat
gatctggtgggatacgattactctcctttggaagattcgaaagttgcagagttcgtggat
aaaatttatgagatggtgaggaaggcagaaaatgatttgaagaaacttcagacggagaac
agtaggaaggaaagagaattgcaagaggaactggaccggttgtcaaccatgaagacgtct
gcccaagctacgaaaaagagcaaagaggaacaaatcattagacttaccgagaagatccgc
acatctgaggcaaccttccattccatctctaacccctctgtcgaactcgaactcaaccag
aataagcttacagagttggaggcagacctctcaaaattccaagctgagatcactgatgcc
aagtatgacgagaagattaaccaaaaaggccttttgatcaggcaaaaggagctggagagg
gataatatcaatgcagagttggctgtgttgaacaggaaggcagactcgagggcgaagtta
gatctgcagaggaacgagttggagggcaaaaactcacaaatatcaacattattaaaaacc
cacgaggctaagtttagagagctcgtcgaggtagatatacatgatgtcaaaccagaagac
atagaggataaggtcattggtgccatcagtcgaaaggacagagatctcatacaagaagaa
aacaatgcatcagctctcaacagggatcattctcaagtacaagcatcgcttagtcgagct
cgagaggaactcgcaatcaagaagcgagagattcacaacatgcaacgcgagattgaggct
gcgatttacaatgtcaaccagccggctgaagaggaggaagtgcctgctgaggaggccaag
aatttggcagaggcctttgatatctgtcgaagcgagattgaaagtgtgcaacgagcgatc
atggacaagcaagggagcagggtcgtatgggaaggattgctcacaacggtcaaagcgggt
ggagtctgtgaagcctgtaaccgtgggatcaagcacgaggagaagaatgctgtcactaga
catatggaagcaaaaatccggcaactcatggaagctgagcaagctggggttgacgctgaa
attgaagtggaaaagtcatggactgagatcctcgatgcccttatcagagttgagcctcat
gaagcgaaaattcaggacttgcagagaagagtcatccctcgtttggagacgcagatcaag
gaaggggaggaaaagcttcgttcattggtgaaagaggttgatgactcaaagacatcaatc
cagaagcttaagtccgcctctcgtgatttacaaaatctcaaggctacagcgtcctatatc
aatcgcttgtacattgagaccggtgatttgaaagcgaacgtgaagagacttcaaaccgag
ctagagagttctggtagctctaagacggtggaggaggtacaaaaagaggtggatcgggtg
agccaggaaatcaaaacgctgtcgcgagagcagcaagccttttcttctgaaaaagagctt
aaggtcaatgctcttcgggcgactcaagacgaaatcggacgcaagagccttcatattggt
agactcaaggctcaacaggacaagagaaaaatggaggaggaagctttgagcgatatgcag
aacactctcggaacactccatgacgaacttcaggatctggaccagactgttcaggccgcg
gaggctccttggaaggaaaagaatgaaacactcggcagattcaggacagaacgggcgaat
gcagagaaagaagctagcacacaagttaggatgtatcagtcaagtttaggggagattgaa
gggaagcacaaagcttgtcaagcatatgtggcggagggtaatgacaggaagatccgagag
aatgaggcagccatgtctgaaattaaacgtcaaatctcacaatccaatgacgctcgcgct
gcgctcgaagctgaaatatctgctttgtcatccgaactttcaaaatccgaatcacttaaa
gcaaacatcagaagtaacctgaagtatcgcgaagacgggaagaaaatcgagatggttcaa
gcagaacttgacgagttggatttggacagtgctgctgaaagtagagccaagttcaataaa
gaatacaaggggatgctggacgaagagacagaagctcagggcctaatggcaatcacccaa
ggaggtctgctggaaatgaggacaaatcgccaaaaaatggagaaaactttgaagacggat
tacaagaacatcgacaaggaacacaaagagcaactaatcaagactacaattagtgaatat
gcgaataatgaccttgagaagtacgggaaagccctggataacgcgatcctcaagtatcac
tccatcaagatggatgagatcaacgatactattggtcatctttggaacaaaacttatcaa
gggactgatatcgacgggatccgaattgtttccgatcatgacgaggcttcgacaagtact
cgcaagagttataactatagagtggtcatggtgaagaatgaagtggagctggacatgaga
ggaagatgctctgctggtcagaaggtattggctagcatcatcattagattggctctggcg
gagagttttggacaaggctgtggtgttttggcccttgatgaaccgactacgaatctggat
caagagaatatcaatgcgctggccgaatctctggctgagatcattcgggaacgccgacaa
caagccaacttccagcttatcgtgatcacacacgacgaagggttcttgcagcgtttggcg
gagcaggatgttgttgagtattactggcgagtgtcaagagacgcttcgcagaagagtgtg
ttggagagacagagagtaggtagaggatag

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