Clostridium novyi: NT01CX_1236
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Entry
NT01CX_1236 CDS
T00431
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cno
Clostridium novyi
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cno03400
]
NT01CX_1236
Enzymes [BR:
cno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT01CX_1236
DNA repair and recombination proteins [BR:
cno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NT01CX_1236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
BTB_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABK61679
UniProt:
A0PY67
LinkDB
All DBs
Position
348205..351915
Genome browser
AA seq
1236 aa
AA seq
DB search
MGEVKWTKEQQQAIDVHGCNLLVSAAAGSGKTAVLVERIIKMITDIKNPVDIDRLLVVTF
TNAAASEMKERIGKAIGKELTKHPKSKQLQRQLTLLNRASITTIHSFCLETIRNNFHYID
LDPNFRIGDETETVLLKGEIIEGIFEDLYEPENCTQEFLNLVEFYSSNKDDVALQNIVLN
LYDFVMSSKNPKKQLQDMAEQFNVDESYNFGESKWAKVLMDDVELELSGLKDMMEEALKL
INDTNGLDAYLEGFTDELLMINDLILNAKTSWDSLYNGLSEVKFGRLKTCRNCEDKKTQE
KVKDIRNKVKKQLQDEIKKKITSYSTKEIVTDLRNLYPIMKSLCDLVIEFMDRYSKAKKE
RGIIDFNDFEHFCLEILGHEEVALKLRQKYIEILVDEYQDSNYVQEAIINSIARRHEETG
NPINVFMVGDVKQSIYRFRQAKPELFLKKYNSYLEGENAKERKVNLFKNFRSRKEVLDGV
NFIFKQIMSENIGELEYGDDEALYLGADFEQYEDKSLVGGPIELNLIEKSKDETKEEESE
EEEILSNIQVEARFVAKKINELVNPKIGEPFKVYDNELKAYRNVEYRDIVVLLRSTSNWA
PVFTDEMKENLIPAYADVGNGYFETVEIKTILSLLEIIDNPRQDIPLIAVLRSPIASFTP
EELIDIRLENKDGDFYGGLLKVASSEDRDDNWILFKRKCNSFLEKLNYWREKSIHMPIDE
FIWYLYMETGYYGYVGALAGGMQRQANLKILFQRARQYEKTSYKGLFNFINFINRLKVSS
GDMGSAKILGENDNVVRIMSIHKSKGLEFPVIILSALGKNFNMQDLNKRILYHDELGFGP
DYIDLDKRIIYETVPKSALKKKIKLESLSEEMRILYVALTRAKEKLILTGAVNDIEKSAK
KWSYALEGEDYKLSQYQVMTGKNYLDWICPVIMRHKDGEVLRELAGIEIFEKVNLLSDES
SWKITTDNISGILQNDDETNEIILEDIKEIEDIEESSSYYDEINERLNFKYKYIESSKLP
TLLTVTELKRMKNSSMYEDYSRDMYTPKLVKKPMFMEKDKKLKGAEKGTAMHAVMQKINY
SEELTIEDINRQMETMVEKEFITKEQADSVEAEKILNFFKSNIGKRLLKAENVRRETPFH
MELKSTEIYESLPKEIYENENIMIQGIIDCYFEEEDGIVLLDYKSDYFKEGQEEAIIKKY
KVQIDYYARAIEELTGKVVKEKYLYLFYGDKEVEIK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
ttgggagaagtaaagtggactaaagagcaacaacaggctatagatgtacatggctgtaat
ttattagtttcagcagcagcaggttcgggaaagacagcagtgcttgttgaaagaataata
aaaatgataacagatataaaaaatccagtggatatagatagattacttgttgtgacattt
accaatgcagcagcatctgaaatgaaagagagaatcggaaaagccattggaaaagaatta
actaaacatccaaagtcaaaacaacttcaaagacaactaacactactaaacagagctagt
ataacaactatacattcattttgtcttgaaactataagaaataattttcactatatagac
ttggatccaaactttagaattggtgatgaaacggaaactgtgcttttaaaaggtgaaatt
atagaggggatttttgaagatttatatgaacctgaaaattgtacacaggaatttttaaat
ttagttgaattttatagtagcaataaggatgatgttgcccttcaaaatatagtattaaat
ttatatgattttgtaatgagttcaaaaaatcctaaaaaacaacttcaggatatggcggaa
caatttaatgtagatgaaagctataattttggagagtctaaatgggctaaggttttaatg
gatgatgtggaattggaacttagtggacttaaagatatgatggaagaagccttaaaatta
atcaatgataccaatggacttgatgcttatttagaaggatttacagatgaacttttaatg
attaatgatttaattttaaatgcaaaaacatcttgggatagcttatataatggtttatca
gaagttaaatttggaagattaaaaacttgtagaaattgtgaagataaaaaaacacaagaa
aaggttaaagacataagaaacaaggtaaaaaaacaattacaggatgagataaagaagaaa
ataacatcatacagtacaaaagaaattgtaacggatttaagaaatctatatcctataatg
aaatccctttgtgacttagtaatagagtttatggatagatattctaaggctaaaaaggaa
agaggaattatagattttaatgactttgaacatttttgtttagagattttaggtcatgag
gaagtggcattaaaattaagacaaaaatatattgagatattagtggatgaatatcaggat
agtaactatgtacaagaggcaattataaattctatagcaagacgacatgaggaaacagga
aatccaattaatgtgtttatggttggagatgtaaagcaaagtatatatcgtttcagacaa
gcaaaaccagaattatttcttaaaaaatataattcttatttagaaggagaaaatgcaaaa
gagagaaaagtaaatttatttaagaacttcagaagtagaaaagaagttttagatggggtc
aactttatatttaaacagataatgtctgagaatataggggaacttgaatatggagatgat
gaggcactatatttaggtgctgattttgaacaatatgaggataaatcccttgtaggtgga
ccaattgaacttaatcttattgaaaaatcaaaagatgaaactaaagaagaggagagtgaa
gaagaggagattttatctaatatacaagttgaggcaagatttgtagctaaaaaaataaat
gaacttgtaaatcctaaaataggagagccttttaaagtttatgataatgaattaaaggca
tatagaaatgttgaatatagagacatagtagtgcttcttagaagtacatcaaattgggct
cctgtatttacagatgaaatgaaagaaaacctaataccagcttatgctgatgtaggaaac
ggatactttgaaactgttgaaataaaaactatactatctttacttgaaattatagataat
ccaagacaagatatacctcttattgcagtattacgttcacctattgcatcatttacacca
gaagaacttatagatataagattagaaaacaaagatggagatttctatggtggattatta
aaagtagcaagtagtgaagatagagatgataattggattttgtttaaaagaaaatgtaat
tcctttttagaaaaacttaactattggagagaaaaatccatacatatgccaattgatgaa
tttatatggtatttgtatatggaaacgggatactacggatatgtaggcgcattagctggt
ggaatgcaaagacaggctaaccttaaaatattatttcaaagagctagacaatatgaaaaa
actagttataaaggattgtttaattttataaactttataaacagattaaaggttagtagt
ggcgatatgggaagtgccaaaatacttggagaaaatgataatgtagttagaataatgagt
attcataaaagtaaaggtcttgaatttccagttattatattaagcgcccttggaaagaac
tttaacatgcaggatttaaataaaagaatactttatcatgatgaacttggctttggtcct
gattatattgatttagataagagaatcatatatgaaactgtaccaaaatctgccctaaag
aaaaaaataaaattagaaagcctatcagaagaaatgagaatactatacgttgcacttaca
agagcaaaagaaaaacttattttaactggtgccgtaaatgatattgaaaaatctgcgaaa
aaatggtcttatgcccttgaaggggaagattataaactttcacaatatcaagttatgaca
ggtaaaaattatttagattggatatgtcctgttattatgagacataaagatggtgaagtt
ttaagggaacttgcaggtatagagatttttgaaaaagttaatttattaagtgatgagtct
agttggaagattaccacagataatattagtggaatattacaaaatgatgatgaaactaat
gaaattattttagaggatataaaggaaatagaagatatagaagaaagtagttcttattat
gatgaaatcaatgagaggttaaactttaaatataagtacattgaatcttcaaaattacca
acattgttaactgttactgaattaaaaagaatgaaaaattctagtatgtacgaagattat
tcaagggatatgtatactcccaaacttgtgaaaaaacctatgttcatggaaaaggataaa
aaactaaaaggtgcagaaaagggtactgctatgcatgctgtaatgcaaaagattaattac
agtgaagaattaaccatagaggatataaatagacaaatggagactatggttgaaaaagaa
tttattacaaaagagcaagcagatagcgtagaagcagaaaaaatattaaatttctttaaa
agtaatataggaaaaagacttttaaaagctgagaatgtaagaagagaaactccttttcac
atggaattaaaaagcacggaaatatatgaaagcttgccaaaagaaatatatgaaaatgaa
aatataatgattcaaggaataatagactgttattttgaagaagaggatggaattgttctt
ttagactataagagtgactattttaaagaggggcaagaggaagctataataaaaaaatat
aaagtgcaaatagattattacgcaagggctatagaagaattgacagggaaagtagtaaaa
gaaaaatatttatatttattttatggagataaagaagttgaaataaagtaa
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