Contarinia nasturtii (swede midge): 116345503
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Entry
116345503 CDS
T08003
Name
(RefSeq) titin-like
Organism
cns
Contarinia nasturtii (swede midge)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C1-set
V-set_CD47
BiPBP_C
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
116345503
NCBI-ProteinID:
XP_031630787
LinkDB
All DBs
Position
Unknown
AA seq
2112 aa
AA seq
DB search
MEGGLEKIQDLEDSVRGKQEIIEETKGRAPVFTVPLSNVDSLREGENVHFEARVTPTDDP
KLKIEWYWNGKPLKTGSRFRTFCDFGFVILEISPVYPEDSGEYACRAINEYGEAVTTASM
KVQGKRSIILESQLPKGMEGTIDRIAELEGLGVQYGESTPEEETGKPPEFITSPADLTIN
ENGLAHFECRLTPIHDPSLQVEWYHNGKALWSGSRIKTINDFGFVILEIAGCYQRDSGLY
TCKATNLVGVDETTCTLDCRSSQQILTTTQNEAGLEQIQYLEDRSKYTRTEVSDEVTKQT
PVFTTSLKNVDIKEGQRAHFECRLIPVSDPTMKVEWYHNNKPLKSGSRFTETNNFGFVAL
DILSCLPEDSGTYTCRSINALGEAVTSAIASIHTRRAIYTESQHEGALRSINHLEDTSRH
QTRSVQDEIITQAPVFTMPVRDIRVAENQAVHFEARLIPVGDPKLKVEWLRNGVPLEASN
RLTTMHDFGYVALNMKYVNPEDSGTYTIKAINELGQAVTSASLIVQSKAALQMETQNESA
LQKIHQLEDTSRHHRREEDDTIVRQAPRFITQLSGPTNLHEGQSAHYECRIEPYPDSNLK
VEWFHNGQPLQSGHRFRTTYDFGFAALDILTVYAEDSGEYTCKVTNLNGQAQSAVKLGVQ
PRASIVYETQNDSALEKINYLEGDARFKRKTDDEPIILEKPEFGRPLRNAAVQEGKPVHL
EATLTPVNDPTMVVEWYCNGKPVQQGHRFKTTYDFGFVALDILYAHSEDTGTYMLRAKNA
VGEAVTTCSVSAAANAGLFLETLDEQRLQKIRQLESYQKPKTPEVEEVGQKPVFLTPLTS
LENLKEGDHAHLECRVEPINDPNLKIEWYRNGKRLTAGHRYRTTHDFGYVALDILYVYGE
DSGTYMIQAINALGEAMNTCNIRCINRKSIILDTQHPDGLEKIQKLESRGAQTRNEIAEI
PITPPRFTTNLHGTTEIFEGQTAHFEAQVEPIHDSNLRIEFYHNGKLLQSASRFHTTFDF
GYISLDIQKAVAEDAGEYTCKAFNALGESRSTIRLNVIAKGGIITESVRPEGLEKIRQLE
LGTPHTRPEVPEPVTRQRPVFTQPLQNIDSIPEGQTAHFECRLIPVGDPTLKVEWYRNEK
IIEDSSRITKQHDFGFVSMDITHIRAEDQGVYMCRATNALGEAVTTAAMKIRTHASIQMD
TQHPESIPKLQQLEQPARAPMPEPERVFEKPIFTQLLTGPAELWEGQHAHFEARVVPVGD
PNLRYEWYVNGVELKMGSRLRTSHDFGFVSLDISSVVTEDAGIYMCKAINLAGEAVSSTS
MKVKGKSSIVGDTLSPESWQQIQLKEAAMNRVPEMFVDATPQQAPVFTTHLQSFEKLVEG
QNIRLEAQVEPRADPNLKIEWYKNGVSLTTGSRIRSTFDFGLVTLQINSLRDDDSGIYTC
KATNLVGEAVSTSSIKVGDRHWLLGDSLHPDALPRIAQLEEPKAGRPEFPEPVYESPVFI
THLNNIECKENDNVRFECNVEPARDPTMQIEWFFNNKPLSAGSKYKTTYDLGYVALDIIS
TYAENSGIYTAKATNSKGSATTSGTLRCVGTQTMFLDTQHPQGQSGLEAVQETEEELANR
YKREVIKPEKDYPAPVWTKPLESEFRLNENQALHLEGQVEPKEDPNLKIEWFLNGKVLQH
GSRFKMNSEFGFVTLDLVDVYERDQGIYTCKASNRKGEAFTTSTIVCSGKESIIDSTQHP
KGAEGLETIQNLEESLRKPDSKAVQAESGQPPRFTTEFVTIPNISDGEIAHYDALLVPTG
DQSMVVEWFYNGKVLEASHRFKTVYAFGMVVLEIIGTKIEDSGTYTCRATNAHGTAEIST
YLTCVERLAGQPPKFTTQIQNLAGLKDGQSAHFECTLVPVNDPDLKVEWYHNGKPIRHST
RIKPVSDFGYVLLDIAYVQSHDSGEYVCQAKNKYGEDFTRASIECFGKSGVFYDSLQPQS
LERIRELEALGLPQHATPQTPTGEAPRFVTELQDISKLIEGQSAHFEARLTPINDPDLVV
EWYYNGKKLPHGHRFRTFHDFGIVILDILYCYEENSGEYECRASNKYGTAVTKSSLRCYS
KTNLVLDSQLPR
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgggttagaaaagattcaagatcttgaagacagtgttcgtggcaaacaagaa
attattgaagagacaaaaggcagagcacctgtatttactgttccattgtctaatgtagac
agtttacgtgaaggtgaaaatgttcactttgaagcaagagtcactccaactgatgatcca
aaattgaagattgaatggtactggaatggcaaaccattgaaaacgggttcacgtttccgt
acattctgtgattttggctttgttattttggaaatttctcccgtctatccagaagatagt
ggtgaatacgcatgccgtgcaataaacgaatacggagaggccgttacaactgcatcgatg
aaagttcaaggaaagcgtagcattattcttgaatcacaattgcccaaaggaatggaaggt
actattgatcgaattgctgagcttgaagggcttggcgttcaatatggtgaatcaacgccc
gaagaagaaactggcaaaccaccagaatttatcacttcaccagctgatctaaccatcaat
gaaaatggtttggctcactttgaatgtcgattaacaccaattcatgatccaagcttacaa
gtcgaatggtatcacaatggaaaagctttgtggtctggttctcgtattaagacgatcaac
gattttggctttgttattttggaaattgctggttgctatcaacgtgattcgggtctatat
acttgtaaggccacaaatctagttggtgtcgatgaaacaacatgtactttggattgccgt
agcagtcaacaaattttgacaacaactcaaaacgaagccggattagagcaaatccaatat
ttggaggatcgttcgaaatacacacgcaccgaagtgagcgatgaggtgacaaaacaaaca
cctgtcttcacaacatcattgaaaaatgttgacattaaagaaggtcaacgtgctcacttc
gaatgccgtttaattcctgtttccgatccaacaatgaaagttgaatggtatcacaataat
aagccattgaaatcgggatcacgtttcactgaaaccaacaattttggctttgttgcattg
gatattctttcatgcttgccagaagattcaggtacttatacctgtcgttcaatcaatgca
cttggtgaagccgttacatcggctattgcgtcgattcatacaagaagagccatttacact
gaatcgcaacacgaaggagcactacgcagcatcaatcatttggaagatacatctagacat
caaacaagaagcgttcaagacgaaatcattactcaggcacctgtattcaccatgcctgta
cgtgacattcgcgttgccgagaaccaggccgttcatttcgaggcacgtctaatcccagtt
ggagatccaaaactcaaagtcgaatggttgaggaatggtgtgccactagaagcatctaac
cgattgacaaccatgcacgactttggatatgttgctttaaatatgaaatatgtaaatcca
gaagattcaggaacttatacaatcaaagcaatcaatgaattggggcaggctgtaacatca
gcatcgcttattgtccaatccaaagctgcacttcaaatggaaacgcaaaatgaatcggct
cttcagaagatccatcaattagaagatacttcacgtcatcaccgtcgtgaggaggatgat
actattgtgcgtcaagcaccacgattcattactcaattgagcggtccaaccaatttgcat
gaaggtcaaagtgcacactatgagtgtcgcattgaaccgtatcccgattcaaatctaaaa
gttgaatggttccacaatggacaaccattacagtcgggccatcgattccgtacaacgtac
gactttggattcgctgcacttgacattttgacggtgtatgctgaagatagtggtgaatac
acatgcaaggttaccaatctcaatggtcaagctcaatcggctgttaaattgggcgtacaa
ccacgtgcaagcattgtatatgaaactcaaaatgatagcgctttagaaaagattaactat
ttggaaggtgatgctcgcttcaagcgcaaaactgatgacgaaccaattattttggagaag
ccggaattcggtagaccattgcgaaatgcggccgttcaagaaggaaaaccagtacatctg
gaagccactttgacgccagtcaatgatccaacaatggttgttgagtggtactgcaatgga
aaaccggttcaacaaggtcatcgatttaaaacaacttacgattttggctttgttgcactt
gacattctatatgcgcattcagaagacactggtacttatatgcttagggcaaagaacgca
gttggagaggctgtaactacatgttctgtttcggcagctgccaatgccggtttgttcttg
gaaacattggacgaacagcgattacaaaagattcgtcaattggaaagctaccaaaagcca
aagacaccagaagttgaggaagttggtcagaagccagtgttcttgactccattgacaagt
ttggaaaatcttaaggaaggcgatcacgcccatttggaatgtcgtgttgagcccatcaac
gatcccaatttgaagattgaatggtatcgaaatggaaaacgtcttacagccggtcatcgt
taccgaacaacacatgactttggctatgttgcacttgacattttgtatgtttatggtgaa
gattccggtacatacatgattcaggcaatcaatgcacttggcgaggcaatgaatacatgt
aatattcgttgtatcaatagaaagagcattattttggatacacaacatccagatggtttg
gaaaagattcagaaacttgaatcacgcggagcacaaactcgcaatgaaattgctgaaatt
ccaattacaccgccaagattcaccaccaatcttcacggtacaactgaaattttcgaaggt
caaacagcccatttcgaagctcaggtcgaaccaatccacgattccaatttacgcattgaa
ttctatcacaatggaaaactattgcaatccgcttcacggttccatactaccttcgatttt
ggttatatttcgttggacatccaaaaggccgtagctgaagatgctggtgaatacacatgc
aaggcatttaacgcacttggtgagagtcgttcaacaattcgattgaatgtcattgcaaag
ggtggcatcatcactgagtcagtacgacctgaaggtcttgaaaagattcgtcaattggaa
ttgggaacaccgcacactcgaccagaagtgccagaaccagtcacaagacaacgtcctgta
ttcactcaaccattgcaaaatatcgattccattcccgaaggtcaaactgcacactttgaa
tgccgtttgattccagtgggtgatccaacattgaaggttgaatggtatcgtaacgaaaaa
attatcgaagacagttcacgtattacaaaacaacatgactttggttttgtttccatggac
attacccatattcgtgccgaagaccaaggtgtatacatgtgtcgggcaaccaacgcacta
ggagaggctgtcacaacggctgcgatgaaaattcgtacacatgcaagcattcaaatggat
acacaacacccagagagtatccccaaattgcaacaacttgagcaaccagcacgagcacca
atgcctgagccagagcgcgtattcgaaaagccaatatttacacagcttttgactggtcca
gctgaattgtgggaaggacaacatgctcactttgaagcacgcgtggtaccagtcggtgat
ccaaatttgcgctacgaatggtatgtcaatggtgttgaattaaagatgggatcaagattg
cgtacatcacacgattttggattcgtttcactggatattagttctgttgtgactgaagat
gctggcatttacatgtgcaaagcaataaatttggccggtgaagctgtatcatcgactagc
atgaaagtaaaaggaaaatcatcaattgttggtgatacgttgtcaccggaatcatggcaa
caaattcaattgaaagaagctgcaatgaatcgtgtaccggaaatgtttgttgacgcaaca
cctcaacaggcaccagtcttcacaacccacttgcagagcttcgaaaaattggtcgaagga
cagaacatccgattggaagctcaagttgaaccacgtgccgatccaaatttgaagattgaa
tggtataaaaatggtgtgtcgcttacaactggttcacgcattcgaagcacatttgatttt
ggtttggtcactttgcaaattaattcattgcgcgatgatgattcaggaatttacacttgt
aaagcaacaaatttggttggcgaagcagtttcaacgtcttctattaaagttggtgatcgt
cattggttgctcggagactctttacatccagacgcattgccacgcattgctcaattggaa
gaaccaaaagcaggacgacccgaatttccagaaccagtttatgaatcgccggtgtttatc
actcatttaaataacatcgaatgcaaagaaaatgacaatgttcgctttgaatgtaacgtt
gaaccggccagagatccaacaatgcaaattgaatggttcttcaataataagccattgagt
gccggctcaaaatacaagaccacctacgatttgggatatgttgcacttgacatcatttca
acctatgccgaaaactctggcatttatactgctaaggcaacgaattcaaagggctcagcc
accacatcgggtaccttgcgatgcgttggaacgcaaacaatgttcttggatacacaacat
ccacaaggacaaagcggattggaagccgttcaagagaccgaagaagaattggccaataga
tataaacgtgaggtaatcaaaccagaaaaagattacccagcaccagtttggaccaaacca
ttagaatcagagttccgtttgaatgaaaatcaagctcttcatttggaaggtcaagttgaa
ccgaaggaagatccaaatttgaagattgaatggttcttgaatggtaaggtgttgcaacat
ggttctcgattcaagatgaacagcgaatttggttttgtaacacttgatttggtagatgtg
tatgaacgcgatcaaggtatttatacatgcaaagcaagcaatagaaaaggagaagccttt
acaaccagtacaattgtttgttccggcaaagagagcattattgatagcacacaacatcca
aaaggtgctgaaggcttggaaacaattcaaaatttggaagagtcattgcgtaaaccagat
tcaaaagctgttcaagctgaaagtggtcaaccaccacgtttcacaaccgaattcgttacg
attccaaatatctctgatggtgaaattgcccactatgacgcgttgcttgtaccgaccggc
gatcaatcaatggtcgtagaatggttctataatggaaaagtacttgaggcaagccatcgt
ttcaaaactgtatacgcatttggtatggttgtgctggaaataattggaactaaaatcgaa
gattctggcacttatacgtgccgtgcaacaaatgcgcacggaacggccgaaattagtacg
tacttaacttgtgttgaacgtttagccggacaaccacctaaattcacgactcaaattcaa
aacttggctggacttaaagatggtcaatcagctcactttgaatgcacattggttccagtt
aatgatccagatttgaaagtggagtggtatcataacggaaaaccaattcgtcactcaacc
agaatcaagcccgtgtctgattttggatatgttttgctcgatattgcctatgtacaaagt
cacgattctggcgaatacgtatgtcaggcaaagaataagtatggtgaagatttcactcgt
gcatctattgagtgcttcggaaagagtggcgttttctatgacagcttgcaaccacaatca
ttggaaagaatcagagaattggaagcattgggcttgccacaacatgctacaccacaaaca
ccaactggagaagcaccacgattcgttaccgaattgcaagatatttcaaaattgattgaa
ggtcaaagtgctcactttgaagcacgtttaacaccaattaacgatcctgatttggttgtt
gagtggtattataatggaaagaaattgccgcatggtcatcggttccgtacgttccatgac
tttggtattgtcattttggacattttgtactgttatgaagaaaactctggcgaatatgaa
tgccgtgcttcaaataaatacggcactgcagtgaccaaatcatccttgcgctgttattca
aagaccaatcttgttcttgactcacaattgccaaga
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integrated database retrieval system