Cedecea neteri SSMD04: JT31_08925
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Entry
JT31_08925 CDS
T03298
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
cnt
Cedecea neteri SSMD04
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnt03009
]
JT31_08925
03016 Transfer RNA biogenesis [BR:
cnt03016
]
JT31_08925
Enzymes [BR:
cnt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
JT31_08925
5.4.99.29 23S rRNA pseudouridine746 synthase
JT31_08925
Ribosome biogenesis [BR:
cnt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JT31_08925
Transfer RNA biogenesis [BR:
cnt03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
JT31_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
RRM_7
Motif
Other DBs
NCBI-ProteinID:
AIR04730
UniProt:
A0A089RDW7
LinkDB
All DBs
Position
1907733..1908392
Genome browser
AA seq
219 aa
AA seq
DB search
MLMEPYNPPLDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPLAESV
HRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPRPEEGLVDLPLICDWP
NRPKQKVCYETGKSAQTGYQVLDYAADNTARIQLKPITGRSHQLRVHMLALGHPILGDRF
YATPEALAMAPRLQLHAEMLTITHPGYGTPMTFKAPADF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggaaccttacaatccgcctcttgatccctggctggtcattctttatcaggat
gagcacatcatggtggttaacaagccaagcggcctgctgtccgtcccggggcgtcttgag
gagcacaaagacagcgtgatgacgcgaattcagcgcgacttcccgctggcggaatcggtc
catcggcttgatatggcaaccagcggcgtgattgtcgtggcgttgaccaaggcggcagag
cgggagttaaagcgccagttccgcgaacgcgaacctaaaaagcagtacgtagcccgcgtt
tggggccatccgcggccggaagaaggtttggttgatttgccgctgatttgcgactggcct
aatcggccaaagcaaaaggtgtgttatgaaacgggaaaatctgcgcagaccgggtatcag
gtgctggactacgcggcggataataccgcccgtatccaactgaagccgattaccgggcga
tcgcaccagctccgcgttcacatgctggcgcttgggcatccgattctcggtgaccgcttc
tacgccacgccggaggcgctggcaatggcaccaaggcttcaactccatgccgagatgctg
accatcacgcacccaggctacggcacgccaatgacctttaaagctccggctgacttctaa
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