Caldicellulosiruptor obsidiansis: COB47_0010
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Entry
COB47_0010 CDS
T01293
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cob03032
]
COB47_0010
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_0010
Enzymes [BR:
cob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
COB47_0010
DNA replication proteins [BR:
cob03032
]
Prokaryotic type
DNA Topoisomerases
COB47_0010
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COB47_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADL41390
UniProt:
D9TGQ4
LinkDB
All DBs
Position
8994..11423
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AA seq
809 aa
AA seq
DB search
MEELDFRIIPVEIQEEMKKSYIDYAMSVIVSRALPDVRDGLKPVHRRILYAMNEIGLTPD
KPYRKSATVVGHVLAKYHPHGDAAVYESLVRMAQDFSMRHPLVDGHGNFGSVDGDPPAAM
RYTEARMSKIAVEMLRDIEKETVDFMPNFDESAKEPKVLPSRFPNLLVNGSQGIAVGMAT
NIPPHNLAEVIDAIVYILDNENATLDDIMKIIKGPDFPTGGYIIGKKGIRDAYATGKGKI
IVRAKTSIEQTSKGRQRIIITELPYMVNKARLIEKIAELVHEKKIDGISDIRDESDKEGL
RIVIEIKKDADANVVLKQLYKNTQLQDSFGIIMLALVDNQPKVLTLMDMLNLYIEHQKEI
IVRRTRYDLKKAEERAHILEGLKKALDHIDEIISIIRSSKTVSEAKDRLIQRFKFTDVQA
QAILDMRLQRLTGLERQKIEEELAELIKMIEYYKNVLASEAMVKEIIKKEILEIKEKYKD
ERRTKIIQDEHEDFEEEELIQEQETVVTLTHFGYIKRLPLDTYKSQKRGGRGITGISTRE
DDFVEDVFVTTTHHYILFFTDKGRVFRLRAYEVPEGSRQAKGTAIVNLIQISKDEKITAT
MAVKDFKEGYLMMCTKNGTIKKVLLSEFENTTKAGKKAITLADDDSLVDVKLTSGNDEVV
LVSGNGYCVVFNENDVRVMGRLAQGVKGMTLEEGDFIVGMEKASDGKYLLCVTENGFGKR
SEIEEYRKTKRGAKGVLTYKVTDKTGKIVDIKMVNDEDEIMICSTEGIFIRLEMSQVPVQ
GRNTQGVKLMRIDGEDIRVSSIARIKAEE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctcgattttaggataattcctgttgagatacaggaagagatgaaaaaaagt
tatatagactatgcaatgagcgtaattgtatcccgtgcactgccagatgttcgcgatggg
ctaaagcctgttcacagaagaatcctttatgcaatgaacgagataggtcttactcctgac
aagccatacagaaagtctgcaacagttgtagggcatgttcttgccaaatatcatccgcac
ggcgatgctgctgtgtacgaaagccttgttcgaatggcacaggacttttccatgcgccat
cctcttgttgacgggcatggaaactttggctctgttgatggagatccgcctgctgctatg
cgttacactgaagcgcgtatgagcaagattgcggttgaaatgcttcgagatattgaaaaa
gaaacagttgattttatgccaaactttgatgagtctgcaaaagaaccaaaggttttgcca
tcacgatttccaaaccttttagtaaatggcagtcagggaattgcggttggtatggcaaca
aacatacctcctcacaaccttgcagaggtaattgatgcaattgtatatattcttgacaat
gaaaatgcaactcttgatgacataatgaagataataaaagggcctgattttccaaccggc
gggtatataatcggcaaaaaaggtataagggatgcatatgcaactggaaaaggaaaaatc
attgtccgggcaaaaacctcaattgaacagacatcaaagggaagacagagaataattata
acagaacttccttatatggtaaataaagcacgattaattgaaaagattgccgagcttgtc
catgaaaagaagatagacgggatttcggatataagagatgagtctgacaaagagggtctg
aggattgtaattgaaatcaaaaaggatgcagatgcaaatgttgttttaaaacagctttac
aaaaacacccagcttcaggacagctttggcataatcatgcttgcgcttgttgacaaccag
ccaaaagttttaactcttatggacatgttaaacctatacattgaacatcaaaaagagata
attgtcagaagaacaaggtatgaccttaaaaaagcagaagagagagctcacattttagaa
gggctcaaaaaggctcttgatcacatagatgagataatatcaattataaggtcgtcaaag
acagtaagcgaagcaaaagacaggttgattcaaaggtttaagtttacagatgttcaggct
caagcaatacttgatatgaggctgcaaagactcacaggtttggaaagacaaaagatagaa
gaagagcttgcagagcttataaagatgatagagtattacaaaaacgtgcttgcaagtgag
gcaatggtaaaagaaataataaaaaaggagattttggagattaaagaaaagtacaaagat
gaaagaagaacaaagataattcaagatgaacatgaagattttgaagaagaagagctaatt
caggagcaggaaactgtagtaacacttacacattttggatatataaaacgtcttccactt
gacacatataagagccaaaaacggggtggaagaggaattacgggaatatcaacaagggaa
gatgattttgttgaagatgtatttgttacaacaacacaccactacattctctttttcaca
gacaaaggcagagttttccgcttaagagcgtatgaagtaccagaaggttcgcgtcaggca
aaaggtactgcaattgtcaatttgattcaaattagcaaggatgaaaagattactgctaca
atggctgtaaaagactttaaagaaggctatcttatgatgtgtacgaaaaatggtactata
aagaaggtactcttgagcgagtttgaaaatacaaccaaggcaggtaaaaaagctataact
cttgcagatgatgatagtcttgtggatgtaaaactaacatcaggcaacgatgaggttgta
cttgtatcgggcaatggatactgtgttgtatttaacgaaaatgatgtcagagtaatgggg
agattggctcaaggtgtaaagggaatgacattagaagaaggtgattttatcgttggaatg
gaaaaagcaagtgatggaaagtatcttctttgcgttacagaaaacggatttggcaaaaga
agcgagattgaagagtacagaaaaacaaaacgtggtgcaaaaggagttttaacttacaag
gtaacagacaagacaggcaaaattgttgacataaaaatggtaaacgatgaggatgagatt
atgatatgctcaacagaaggaatatttataagacttgagatgtctcaagttcctgttcag
gggagaaatacccagggtgtaaaacttatgagaatagacggtgaggatataagagtatca
tcaattgcaaggataaaggctgaggagtaa
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