Capnocytophaga ochracea: Coch_1630
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Entry
Coch_1630 CDS
T00961
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
coc
Capnocytophaga ochracea
Pathway
coc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Coch_1630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_1630
Enzymes [BR:
coc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Coch_1630
Transporters [BR:
coc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Coch_1630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_22
AAA
RsgA_GTPase
AAA_29
APS_kinase
AAA_16
DUF87
AAA_15
MMR_HSR1
DEAD
AAA_25
nSTAND3
AAA_30
AAA_5
AAA_24
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACU93175
UniProt:
C7M795
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All DBs
Position
1944616..1946442
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AA seq
608 aa
AA seq
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MKLKRFIPYILPYKKQAILNIFFNILYSLFSALSFVALIPMLDVLFGKAQTVAEAPVYSG
NLLDLGSYGKAYLNYKVGILAGENTIWALGIVIALVISLFLLKNMFSYLASFFITYLRNG
VLRDLRDALYKKVVSQPIAFFSEQRKGDIMSRMVGDVNEVQYSLLSGLEAFVREPLTILF
SILVMLGISVKLTVFTFVFIPIAAAVISRIGKSLKKNSIALQQEQGRFLSLIEETIGGLR
IIKAFNAEGIFSKKFKESSNTFNRLSNKVMNRQNLGSPMSEFLGILMIAILLWFGGSLVL
VDKTLEGTQFIAFMGLAYNILTPAKAISKASYDMRKGNAAAERILEILDYENPIKECENP
VVISDFTTAVALKDITFAYAELPVLTHFSLEIPKGKTIALVGQSGSGKSTIANLITRFYD
VNQGEVLIDGVNVKDMQTASLRKLIGVVSQDSILFNDTVKNNLLIGKPDATDEELVTAAK
IANAYEFIKDLPKGFDTNIGDAGSKLSGGQKQRLSIARAVLKNPPIMVLDEATSALDTES
ERLVQNALENMMKNRTSVVIAHRLSTIQNADQIVVMQKGQIVEQGTHTELIQRNGMYKKL
VEMQSFEQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaagagatttatcccttatatattgccttataagaaacaggcaatactgaac
atatttttcaatattctttattcactctttagtgcactttcgtttgtggcacttatcccg
atgcttgatgtactttttggcaaagcgcaaacagtagctgaagctcctgtatattcgggt
aatttgttggatttagggagttatggtaaagcctacttaaactacaaagtaggaattctt
gcgggagaaaatactatttgggctcttggaatagtgattgctttggtaatttcactcttc
ttgctgaagaatatgtttagctatttagcttcttttttcatcacttaccttcgcaatggt
gtattacgcgatttgcgtgatgcactttacaaaaaggttgtaagccaaccgatagcattt
ttctcagaacagcgcaaaggcgatattatgtcgcgtatggtaggtgatgtaaacgaagta
caatactcattgctctcgggattggaggcttttgtgagagaacctcttactattctcttt
tctattttggtgatgctaggtattagcgtgaaacttacagtatttacctttgtatttatt
cctattgcagcggcagtaatttcgaggataggtaaatcactaaaaaagaattcaatagct
ttacaacaagagcaagggcgatttctttcgctcatagaagagactatagggggattgcgc
attataaaggcatttaatgctgagggtattttttctaagaaatttaaggaatctagtaat
acttttaaccgattgagcaataaggtaatgaaccgtcagaacttagggtcgccaatgagt
gagtttctcggtatcctgatgattgctattttgctgtggtttggaggctcgttagtgttg
gtagataaaacattagagggcactcaattcattgcctttatgggattggcgtacaatatt
ctcacccccgctaaggctatcagtaaggcatcatacgatatgcgaaaagggaatgcagca
gccgaacgtattttggaaatccttgattacgagaatcctattaaagagtgtgaaaatcct
gttgtaatttctgattttaccactgctgtagctctgaaagatattacttttgcgtatgct
gaactgcccgtactcactcatttttctttggaaatacctaaaggaaagacaattgcctta
gtagggcaatcagggagtggcaagagcactattgcgaaccttatcactcgtttttacgat
gtaaatcagggagaggtacttatcgatggggtgaacgtaaaagatatgcaaactgcctcc
ttgcgaaagctcataggggtggtatcgcaggattctattctttttaatgatacggtaaag
aacaatctgctgataggaaagcccgatgctactgatgaagaactagtgacagcggctaaa
atagctaatgcttatgaatttataaaagaccttcccaaggggttcgataccaacataggc
gatgcaggtagtaaactgagtggcggacaaaaacaacgtcttagtattgctcgtgcagtg
ctgaaaaacccacctataatggtactcgatgaggcaacttcggcacttgatacagaaagc
gagcgtttggtacagaatgccttagaaaatatgatgaagaaccgcacttcggtagtgatt
gcacaccggctttcaacaatccaaaatgctgaccaaatagtagtaatgcaaaaagggcaa
atagtagagcagggtacccatactgagctgatacaaaggaatggtatgtataaaaagtta
gtggaaatgcaatcgtttgagcaataa
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