Corynebacterium pseudotuberculosis 1/06-A: Cp106_1208
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Entry
Cp106_1208 CDS
T02052
Symbol
gatR
Name
(GenBank) Galactitol utilization operon repressor
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
cod
Corynebacterium pseudotuberculosis 1/06-A
Brite
KEGG Orthology (KO) [BR:
cod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cod03000
]
Cp106_1208 (gatR)
Transcription factors [BR:
cod03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Cp106_1208 (gatR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
HTH_PafC
HTH_20
Put_DNA-bind_N
FeoC
HTH_28
HTH_Crp_2
Rrf2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AER69274
LinkDB
All DBs
Position
1316249..1317025
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AA seq
258 aa
AA seq
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MYSEERRRQIASLTAVEGRVNVTELAARFDVTAETIRRDLAVLDREGVVHRVHGGAVANQ
TFQTTEFSLDTRARSASGAKNSIAHAALSYLPESHGGMFLDAGTTTAALAELLSVQPAAK
HWSIVTNSLSIALTLANSGLDEIQLLGGSVRAITQAVVGDTALRTLALMRADVAFIGTNA
LTIDHGLSTADSQEAAIKSAMITNAHKVVVLCDSTKMGTDYLVSFGSVKDIDVVITDSNA
PESFIKALREHDVEVITA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagaagaacgacggcgccaaatagcctctctcactgcggtagaaggacgcgtc
aatgtcactgagcttgccgcccggtttgatgttactgctgagactattcgtcgagacttg
gcggtgctcgatcgtgaaggggttgttcatcgcgttcacggcggcgcggtagcaaaccaa
acttttcaaaccaccgaatttagtttagatacccgtgcgcgttccgcatccggagctaaa
aattccattgcgcatgctgctctatcctacctccctgaatctcatggtggaatgttcctc
gacgcaggaacaaccacggccgcgctagcggaactcttatcagtccaacctgccgcaaag
cactggtcgatcgttaccaacagcctttctattgcgttgacgcttgcaaactcaggcctc
gatgagattcagctccttggcggaagcgtccgcgcaattactcaagcagttgtaggtgac
actgcgctgcgaaccttggccctcatgagggcagacgtcgcgtttatcggaacaaatgcg
ctaacaatcgatcacggtctttccactgctgattctcaggaggcagccatcaaatctgcc
atgatcactaatgcccataaagtggtcgttttgtgcgactcaacaaaaatgggaaccgat
tatctagtcagctttggttcagttaaagacatagacgtagtgattacagattcaaatgct
cctgaatcctttatcaaagccctccgtgagcatgacgttgaagttataactgcataa
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