Comamonas flocculans: FOZ74_11905
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Entry
FOZ74_11905 CDS
T06146
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cof
Comamonas flocculans
Pathway
cof00300
Lysine biosynthesis
cof00470
D-Amino acid metabolism
cof01100
Metabolic pathways
cof01110
Biosynthesis of secondary metabolites
cof01120
Microbial metabolism in diverse environments
cof01230
Biosynthesis of amino acids
Module
cof_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
cof_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FOZ74_11905 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FOZ74_11905 (lysA)
Enzymes [BR:
cof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FOZ74_11905 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEA13674
UniProt:
A0A5B8RY42
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Position
complement(2489964..2491259)
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AA seq
431 aa
AA seq
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MNDAAPLPGRPHLHYRSGALHLEDARLADLAREYGTPLYVYSRAAMLDALAAYQRGFAGR
RARICYAMKANSSLAVLQVFARAGCGFDIVSGGELQRVLAAGADPATVVFSGVGKTRGEM
RQALQAGIACFNVESEAELEVLSAVAQALGMRAPVSIRVNPNVDAHTHPYISTGLKDNKF
GVAHERVLATYRRAAQLPGLQVKGIDCHIGSQITEETPYLDAMDKVLDLVQAVEAQGIAL
EHIDFGGGLGIDYQGDTPPAADALWAKLLARVDQRGYGQRLLMVEPGRSLVGNAGVCLTE
VLYLKPGEQKNFCIVDAAMNDLPRPMMYEAYHAIVPLDQASSAPHQTYDVVGPICESGDW
LGRERSLAVRPGDWLAVLSAGAYCSAMGSTYNTRARAAEVLVDGAQVHLVRERESVSDIF
RCERLLPAEKI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccgcccccctgcccggccgcccgcacctgcactatcgaagcggcgcgctg
catctggaagacgccaggctggccgatctggcacgcgaatacggcacgccgctgtacgtc
tactcgcgcgcggccatgctcgacgcgctggccgcctaccagcgcggctttgccggccgc
cgtgcgcgcatctgctacgcgatgaaggccaactcctcgctggccgtgctgcaggtcttt
gcgcgcgccgggtgcggcttcgacatcgtctcgggcggcgagctgcagcgcgtgctggcc
gccggcgccgaccccgccacggtagtgttttccggcgtcggcaagacgcgcggcgaaatg
cgccaggcactgcaggcgggcatcgcctgcttcaacgtcgagagcgaagccgagctcgag
gtgctgagcgccgtggcccaggcgctgggcatgcgcgcgccggtgagcatccgcgtcaac
cctaacgtggatgcccatacccacccctacatttccaccggcctgaaggacaacaagttc
ggcgtcgcgcacgaacgggtactggccacctaccggcgcgcggcgcagctgccggggctg
caggtcaagggcatagactgccacatcggctcgcagatcaccgaggagacgccctatctg
gacgccatggacaaggtactggacctggtgcaggcggtggaggcgcagggcatcgcgctc
gagcacatcgacttcggcggcggcctgggcatcgattaccagggcgacacgccgcccgcg
gccgacgcgctgtgggccaagctgctggcgcgtgtggaccagcgcggctacggccagcgc
ctgctgatggtcgaacccggccgctcgctggtgggcaacgccggcgtgtgcctgaccgag
gtgctctacctcaagcccggcgagcagaagaatttctgcatcgtcgatgcggcgatgaac
gacctgccgcggcccatgatgtacgaggcctaccacgcgatcgtgccgctggatcaagcc
tcatccgccccgcaccagacctacgacgtggtcgggccgatctgcgagagcggcgactgg
ctggggcgcgagcgcagcctggcggtgcggccgggcgactggctggcggtgctgtcggcc
ggcgcctactgcagcgccatgggcagcacctacaacacgcgtgcgcgtgcggcggaggtg
ctggttgacggggcgcaggtgcacctggtccgcgagcgcgagtcggtcagcgacatcttc
cgctgcgaacgcctgctgcccgctgaaaaaatctga
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