Cohnella abietis: KCTCHS21_37630
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Entry
KCTCHS21_37630 CDS
T05979
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cohn03009
]
KCTCHS21_37630 (rimO)
Enzymes [BR:
cohn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KCTCHS21_37630 (rimO)
Ribosome biogenesis [BR:
cohn03009
]
Prokaryotic type
ribosomal protein modification factors
KCTCHS21_37630 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBI34364
UniProt:
A0A3T1D8G2
LinkDB
All DBs
Position
complement(4213743..4215071)
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AA seq
442 aa
AA seq
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MIEKVSVVTLGCEKNLVDSEIMSGLIHQRGFSLVEKPEDATVIIVNTCGFIDAAKEESVN
TILNLAELKDTSRLKALIVSGCLTQRYKKELMEEMPEIDGIVGTGDFHRINDIIDEALRG
RKPVYVGNPVFNYEENLPRLLSTPRHTAYVKIAEGCDNACTFCSIPIMRGQFRSRSIESI
LAEVKMLADQGVKEISLIAQDSTNYGTDLYEGFKLPELLNRVSEVPGIAWVRLHYAYPGF
FTDELIEAISNNPKVCNYIDMPLQHSEDSILKRMRRPGRQRDVRELVGKIRSRIPEVALR
TSMIVGFPGETEEDFEKLCEFVREIKFDRLGVFTYSQEEDTPASRLPNQLSDEVKQFRQN
TLMEIQREVAKDNASKYVGRTIDVLVERYDGRSDVFIGRSQFDAPEVDGEVYISNCPVQI
GEISKVRITHAYEYDLSGEGIA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatagagaaagtcagcgtcgtcacgctaggctgtgagaaaaatttagtcgactccgag
attatgtcgggactcattcaccaaagaggattctcattggttgaaaagccggaagatgcg
acggttattattgttaatacatgtggcttcatcgatgctgcgaaggaagaatccgtaaat
acgattcttaatttggcagaattgaaggatacgtcacgtctgaaagcactcattgtgtcg
gggtgtttgactcaacgctataagaaagaattaatggaagaaatgccggaaatcgatggg
attgttggtacaggcgattttcatcgtattaatgatattattgacgaggcacttcgtggg
cgcaagccggtctatgtaggaaaccccgtttttaattatgaagaaaacctgccacgactt
ttgtcgactcctcgtcatactgcgtatgtaaaaatcgcagagggctgcgataatgcgtgt
accttctgcagcattccaattatgaggggacagttccgcagccgttcaatagagtctatc
ttggctgaagtgaaaatgttggcggatcagggtgttaaggaaattagcttgatcgctcag
gattccactaactatggtactgatctgtatgagggctttaagctaccagaattgcttaat
cgggttagtgaagtaccagggatcgcatgggtacgacttcattatgcatatccgggcttc
tttacagatgaactaatcgaggcgatctcgaataatcctaaagtatgtaattatattgat
atgcctttgcagcacagtgaggattctatcttaaaaagaatgcgccgaccgggacgccaa
cgcgatgttcgtgagctcgtaggcaaaattcgttctcgtattccggaagtagctctacgc
acgtctatgatcgttggttttcctggtgagacggaagaggatttcgagaagctatgtgag
tttgttcgcgagatcaagttcgaccgcttaggtgtgttcacctattctcaagaagaagat
acacctgcgagccgtttgcctaatcagctatcagatgaagtgaagcagttccgtcagaat
acgttgatggaaatccaacgtgaagtcgctaaggataatgcttctaaatatgtaggacgt
acgatagacgttcttgtagaacgttatgatggacgtagtgatgtctttattgggcgtagt
cagtttgatgctcctgaggttgatggagaagtctatatctcgaattgcccagtgcaaatt
ggtgaaataagcaaggttagaattacgcatgcttacgagtatgatttgtcaggggaggga
attgcgtga
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