Cohnella abietis: KCTCHS21_41660
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Entry
KCTCHS21_41660 CDS
T05979
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cohn
Cohnella abietis
Pathway
cohn03030
DNA replication
cohn03430
Mismatch repair
cohn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KCTCHS21_41660 (holA)
03430 Mismatch repair
KCTCHS21_41660 (holA)
03440 Homologous recombination
KCTCHS21_41660 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cohn03032
]
KCTCHS21_41660 (holA)
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_41660 (holA)
Enzymes [BR:
cohn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KCTCHS21_41660 (holA)
DNA replication proteins [BR:
cohn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KCTCHS21_41660 (holA)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KCTCHS21_41660 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BBI34767
UniProt:
A0A3T1D9J4
LinkDB
All DBs
Position
complement(4631904..4632935)
Genome browser
AA seq
343 aa
AA seq
DB search
MDAKQAFRLIKQGSISPIYVCYGTESYLMNEFIERLLEQVVEPDHREMAIVRFDTGETSL
DVIIEEAETLPFLVPSKVILVRDSVLFASGKESSRIEHHPERLLTYMGQPSETTILIFLV
GHEKLDERKKLVKTAKTNDSIIAFTPLQSEELLQWLNKRASNQGRTMGSSAAEELLRRVG
TDLHALAAEADKLCLHAGQGGTVTAQSVQELVPMATEQNVFKLTEELAALRTAAAITLYY
DLLKQREEPIKLMALLVRQFRNMLYVKELGSQGYTPQQMATQIGLHPYAVKITAEQARKF
SQERLATMLSDLADLDYAMKTGRIEKTIGLELFLLKTGSSGAS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacgctaaacaagcttttcgtttaattaagcaaggcagcatatccccgatatacgtc
tgctacggaacagaatcttatttgatgaatgaatttatagagcgattgctggagcaggta
gttgaacctgaccaccgggaaatggctatcgttcgttttgatactggtgaaacatcactt
gatgtcattatagaagaagcagaaactcttccgtttcttgtgccaagcaaagttatactc
gtcagggatagtgtattgttcgcctcgggaaaagaatccagtcgtatcgaacatcatcca
gagagactgcttacttatatggggcagccatccgaaacgactattcttattttcctagtg
ggtcacgaaaagctggatgaacgtaagaagcttgtcaaaaccgctaaaacaaatgattcc
atcattgcgttcacgccattgcagtctgaagagctgctgcaatggctgaataagcgtgca
agcaatcaaggtcgtacaatgggcagctcagctgcagaggagcttctgcgtcgggtgggt
acggatttgcatgcattggctgcggaggcggataagctttgcttgcatgcgggtcaggga
gggacagtaactgcacaatctgttcaagagctcgtgccgatggcaaccgagcaaaatgta
ttcaaattaacagaggaattagctgcgctcagaactgcggccgccattacgctttattat
gatttgcttaagcaacgtgaggagccgattaagctgatggcgctccttgtacgtcagttc
cgtaacatgctttatgttaaggagcttggaagtcaaggctacactcctcaacaaatggcc
acacagatagggcttcacccatatgcagtcaaaattacagccgagcaggcgcgcaaattc
agccaggaacgtctggcgacgatgctttccgatcttgctgatctagactatgcgatgaaa
accggtcgtattgaaaaaacaataggacttgagctttttttactgaagacaggctcgtct
ggagcaagctag
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