KEGG   Colwellia sp. PAMC 21821: A3Q33_04775
Entry
A3Q33_04775       CDS       T04816                                 
Name
(GenBank) ABC transporter ATP-binding protein
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
colw  Colwellia sp. PAMC 21821
Pathway
colw02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:colw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    A3Q33_04775
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:colw01002]
    A3Q33_04775
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:colw02000]
    A3Q33_04775
   02044 Secretion system [BR:colw02044]
    A3Q33_04775
Peptidases and inhibitors [BR:colw01002]
 Cysteine peptidases
  Family C39
   A3Q33_04775
Transporters [BR:colw02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    A3Q33_04775
Secretion system [BR:colw02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   A3Q33_04775
SSDB
Motif
Pfam: ABC_membrane ABC_tran Peptidase_C39 SMC_N AAA_16 AAA_22 AAA_29 AAA_14 RsgA_GTPase T2SSE AAA_23 nSTAND3 AAA_21 DEAD TsaE AAA_25 PIF1 AAA_30 RNA_helicase Cytidylate_kin PRK AAA_24 Mg_chelatase AAA_18 NTPase_1 ATPase_2 cobW AAA_28 APS_kinase
Other DBs
NCBI-ProteinID: ARD46528
LinkDB
Position
complement(1140265..1142277)
AA seq 670 aa
MPAMRKRFSANLKGMNLQQVIELGDSLGMASRALQCPIDETHKLATPCILHWDLNHFVVL
AQVSGKGKSAKFFINDPALGKRVLTTEEFSKHFTGICLELTPTSKFEVKQEQVRMKFTQL
WSSMSGLKAGLFKLIGLSLVLQLFALMAPYYMQWVVDEVLISFDKPLLTVLALGFALIAI
ISVVTNAVRSWLILRLSSLLNMQMGVNLLRHLLRLPMNYFESRHIGDIVSRFGSLAQIRE
RITTGFVETLVDGVMAITVLIMMALYSFKLTAVVLVAIALYTIVRLALYRPLHQATEEMI
QNSAKEQSNFLENIRGMQTIKLFGNESQRQGIWQNRYAEVINSEIRLGRLNISFDSFNKL
LFGLENVLVIYFAAMMVMANSLSIGMVLAFIAYKGQLTSRFANLIEQIIQFKMMRLHLDR
IADIALTEQEANREGEATFTDEPKGQITLENISFSYSEDQRPILDNINLTLEAGESIAIT
GPSGAGKTTLMKIMLGLLQPTAGKIYLDGKDINHLGLKNYRKYIAAVMQDDTLLAGSIAD
NISFFDPQPNYLKIEQCAHLAAIHDDINKMTMGYNSLVGDMGSNLSGGQIQRLLLARALY
QTPCVLFMDEATSHLDKDNETKISEQIQHLPITRIMIAHRQETINMVEKVYLLNDGTLID
INESISEAIS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgcctgcaatgagaaaacgcttttcggctaatctaaaagggatgaacttacagcaggtt
atagaattaggtgacagccttggtatggctagtcgtgctttgcagtgtcctattgacgaa
actcataaactagcaactccctgtatattgcactgggatttaaatcattttgttgtttta
gctcaggtttcaggaaaaggtaagtcagctaaatttttcataaatgaccctgcgcttggc
aaacgagtcttaacaactgaagagtttagtaaacactttacaggcatctgcttagagtta
acaccgaccagtaaatttgaagtaaaacaagaacaagtgcggatgaagttcactcagttg
tggagctcaatgtctggcttgaaagctggattattcaagttgataggtttatcgctagtt
cttcaactttttgccttaatggctccctattatatgcaatgggtggttgacgaagttctc
ataagttttgataaaccattattgacagttttagcgcttggctttgccttgattgctatt
atttctgtggtgactaatgccgtacgtagttggcttattttacgcttatcaagcttgctg
aatatgcaaatgggggtgaatctacttaggcatttattgcgtttgcccatgaactatttc
gagtcacgacatatcggtgatattgtttctcggtttggctcattagcacagatacgcgag
cgtattaccacgggttttgttgaaacgcttgtcgatggtgttatggcaattactgtctta
attatgatggcactttactcttttaagttaactgccgtggtacttgtggctattgcctta
tacacgatagtacgattagctttatatcgtccactacatcaagcgactgaagagatgatc
caaaattcagccaaagagcaatctaatttcttagaaaatattcgtggtatgcaaaccatt
aagctctttggcaatgaatcacaacgtcaaggtatttggcaaaaccgttatgctgaagtc
attaatagtgaaatccgtttaggccgattaaacatcagttttgactcatttaacaagtta
ctgtttggcttagagaatgtattggtgatctatttcgctgccatgatggttatggctaat
agtttatcgatagggatggtactggcatttattgcctataaaggacaattaaccagtcga
tttgctaacctgatagagcaaattattcaatttaaaatgatgcgtttacatcttgaccgt
attgccgatattgcgttaacagagcaagaagcaaaccgtgaaggagaagctacttttact
gatgaacccaaaggtcaaataaccttagaaaatatttcttttagttacagtgaagaccaa
agacctattttagataatattaacttgacgcttgaagccggtgagtcaattgctataacg
ggtccatcaggagcgggtaaaactaccttaatgaaaattatgttggggttattacagccc
actgcaggcaaaatataccttgatggtaaagatataaaccatcttggtttgaaaaattat
cgtaagtatattgctgcggttatgcaagacgataccttattggccggttctatcgcagat
aatattagtttttttgatcctcaacctaattatttaaaaatagagcaatgcgctcatcta
gctgctattcatgacgatattaataaaatgacaatgggatataactcgcttgtcggcgat
atgggctctaatttatctggtggccaaattcaacgcttattgctggctcgagcgctttat
caaacaccatgtgtgctatttatggatgaagcgacaagtcacctagataaagataatgaa
actaaaattagtgaacaaatccagcatttacctataactaggatcatgattgctcaccgc
caagaaaccattaatatggttgaaaaggtatacctactaaatgatggtacattaattgat
attaatgaaagcatttctgaagctatcagctaa

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