Colwellia sp. PAMC 21821: A3Q33_04920
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Entry
A3Q33_04920 CDS
T04816
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
colw03021
]
A3Q33_04920
Transcription machinery [BR:
colw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3Q33_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_Tnp_ISL3
HTH_10
HTH_24
DUF2089
Lectin_legB
HTH_Tnp_4
HTH_16
HTH_30
DUF134
HTH_AsnC-type
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ARD43702
LinkDB
All DBs
Position
complement(1178573..1179124)
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AA seq
183 aa
AA seq
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MFERSDETLVKQALKGKKSAWVTLVKRYEKNLYNYTLRMVSNPDDALDLMQDVFMAVFRN
LASFRGDSPFKGWMFKIAHYRCIEFYRRKKPTQSLDDTPEQEEQSSDACPEAHLFSGQQA
SLLNKAIHTLPVNQKLVVELKFFQHCTFDDIAKQLGISVNTVKSRLYSALDKLKDHLELD
NVK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaacgaagcgatgaaacgctagtaaaacaagcgctgaaaggtaagaaatcagct
tgggttaccttagtaaaacggtatgagaaaaacttatacaactacactctgcgtatggtg
agtaatcccgatgacgccttagatttgatgcaagatgtatttatggcggtttttcgtaac
ttagcgtcatttcgtggcgacagtccttttaaaggttggatgtttaaaattgctcattat
cggtgtattgaattttatcgccgtaaaaaaccgacgcaatcactcgatgatacacctgag
caagaagagcaaagtagcgatgcctgccctgaggcgcatttattttctggtcaacaagcc
agcctattaaataaagcgatacacactttaccggtcaatcaaaaattagtggtggagttg
aagttttttcaacactgtacttttgatgatattgctaaacagcttggcatatctgtgaat
acagtaaaatcgcgtttgtacagtgctttagataaattaaaagatcatttggagttggac
aatgtcaaataa
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