Commensalibacter melissae ESL0284: GN303_01205
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Entry
GN303_01205 CDS
T06375
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
comm
Commensalibacter melissae ESL0284
Pathway
comm00540
Lipopolysaccharide biosynthesis
comm01100
Metabolic pathways
comm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GN303_01205 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
comm01005
]
GN303_01205 (rfaD)
Enzymes [BR:
comm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GN303_01205 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
comm01005
]
Core region
GN303_01205 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QGT67972
LinkDB
All DBs
Position
276322..277305
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AA seq
327 aa
AA seq
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MIIITGATGFIGSCLQARLYDLKEKTVVIDWLGDEGKWRNIANHVPTDLIFPEYIDDFLV
QHCKVIRAVIHLGAISETTARDGDLVWKTNVNLSKKLWHWCALNQVRFIYASSAATYGGA
NQLEEFTDEPNHIADLKPLNLYGWSKQVFDRFVLEQVRNHQPVPPQWAGLKFFNVYGPNE
YHKGKMISVVKVKFDDIQKGGVPRLFKSDRDGLTDGAQARDFIWVGDVIEIILWLLNNPD
VNGIYNCGTGQARTYLDLAYAVCDAVGCKREVEFIDMPQSLQGQYQYFTQADMTRLKVVG
YQRAFTSLEEGISKYIQDYLLRPDPYL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgattattatcactggtgcaacagggtttatcggttcttgtttacaggccagactctat
gatttgaaagagaagacggttgtaattgactggttgggggatgagggaaaatggcgcaat
attgcaaatcatgtgccaacagatttaatttttcctgaatatattgatgattttctggtg
cagcattgcaaagtaataagggctgtcattcatttgggtgcaattagtgaaacaacggcc
cgtgatggggatctggtttggaaaaccaatgtcaatttgtcaaaaaaattatggcattgg
tgcgctttgaatcaggtaagatttatttatgcttcatctgccgcaacctatgggggagcc
aatcagctggaggaatttacagatgaacccaaccatattgcagatttaaaacccttgaat
ttgtatgggtggtccaaacaggtttttgatcgatttgtattggaacaggttaggaatcat
caacctgtccccccgcaatgggccggattaaaattttttaatgtatatggaccaaatgaa
tatcacaagggtaagatgatttcagttgtaaaggtcaaatttgatgatattcagaaggga
ggtgttccccgtttattcaagtctgatcgcgatggtttgacagacggtgcccaggcccgt
gattttatttgggttggggatgttattgaaattattttatggcttttaaacaatcccgat
gtaaatggaatatataattgtggtaccggacaagctagaacctatcttgatttggcatat
gccgtctgtgatgcggttggctgtaaaagagaggttgaatttatagatatgccccagagt
ttgcagggacaatatcaatattttacccaagctgacatgacacgtttgaaagttgtcgga
tatcaacgggcatttacctcattggaagaaggtatttcaaaatatattcaggattatctt
ttacggccagacccttatttataa
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