Commensalibacter melissae ESL0284: GN303_04370
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Entry
GN303_04370 CDS
T06375
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
comm
Commensalibacter melissae ESL0284
Pathway
comm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GN303_04370 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
comm03400
]
GN303_04370 (mutM)
Enzymes [BR:
comm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GN303_04370 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GN303_04370 (mutM)
DNA repair and recombination proteins [BR:
comm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GN303_04370 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
CBD_PlyG
Motif
Other DBs
NCBI-ProteinID:
QGT68535
LinkDB
All DBs
Position
complement(996982..997845)
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AA seq
287 aa
AA seq
DB search
MPELPEVEIIRRGLEKKLINHTIQSVQRHRINLRQSIPITLETCLANTRIIKFNRRGKYI
LMELSNGLTVLFHLGMSGKIIVQPSGSGYEKQKHEHLTILTYEGECLQFIDPRRFGIIDL
FPTNTTHNLLKMMGPEPLPDTGINVSSHQAILCDYLHEKFKLKKQSIKNTMLDQRVIAGL
GNIYVCESLFLAGISPFQSACELKRQEILLLIQSIQSILLKAIESGGSSMRDYVHSNGEK
GYFQMQWNVYGKEGELCNYCLQKGRKTVIKRAVQAGRSSFYCEICQK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgcccgaagtagaaataattagacgtggattggaaaaaaaattgataaat
catacaatccaaagcgttcaacgccatcgaattaacctacgtcaatctatacctataaca
ttagaaacatgcttggcaaataccagaattataaaatttaatagacgtggcaaatatatt
ttaatggaattaagcaacggattgactgttttatttcacttgggaatgtctggaaaaatt
atcgtgcaaccttctggatcaggttatgaaaaacaaaaacacgaacatctaacaatatta
acctatgaaggtgaatgtcttcagtttatagatccaaggcgttttggaataatagatttg
tttccaacaaatacgacacataatcttttaaaaatgatgggaccagaacctttgcccgat
acagggattaatgtttcctctcaccaggcgatattatgtgattatcttcatgaaaaattt
aaacttaaaaaacaatctattaaaaatacaatgcttgatcaacgtgttattgctgggtta
ggtaatatctatgtttgtgaatctttatttcttgctggaatttcaccttttcaaagtgcg
tgtgaattaaaaagacaagaaattctgttattgattcagtccattcaatccattttgctt
aaagcgatcgagtcaggaggatctagtatgcgtgattatgttcattcaaatggtgaaaaa
ggttatttccaaatgcaatggaatgtttatggaaaagaaggcgaattgtgtaattactgt
ttacaaaagggaagaaaaacagttataaaaagagcggttcaggcagggcgttcaagtttt
tattgcgaaatttgccaaaaatga
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