Actibacterium sp. EMB200-NS6: TQ29_05195
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Entry
TQ29_05195 CDS
T04096
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
con
Actibacterium sp. EMB200-NS6
Pathway
con03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
con00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TQ29_05195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
con03400
]
TQ29_05195
Enzymes [BR:
con01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TQ29_05195
DNA repair and recombination proteins [BR:
con03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TQ29_05195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
PriA_CRR
ResIII
Helicase_C
AAA_22
Imm49
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ALG89695
LinkDB
All DBs
Position
1046306..1048501
Genome browser
AA seq
731 aa
AA seq
DB search
MDLPEFYDEGALVAVLTTQPLDRTLDYRAPEGGCHLGAFVEVPLGPRKVLGVVWGPGEGG
YDLGKVRPVNRVLDAAPMRAEMRAFLTRAAEYTLTPMPAMLRLATRAPGLGGAVSMRKVF
RLGQGRPDRETEARGRVLAVLEEYGGLAFTLSELSGMAGVSTSVIKGLVKQGVVSEEDTP
RDMPYPRLDPAMAGHALTGDQAAAAAALRAGAASGCYGATLLKGVTGSGKTEVYLEAVAE
CLAQGRQALVLLPEIALTAGFLTRVEARFGAKPSEWHSGVTMTERRRCWKMAGQGGAQLI
VGARSALFLPFRDLGLIVVDEEHDTSYKQEDGALYNARDMAVLRASLCSAQVVLASATPS
LESWANVEAGKYRRLDLTSRFGAAVLPEMRAIDMREEDLPGNRWISPTLQREVTARMAAG
EQALLFLNRRGYAPVTICRACGHQIGCDHCDARMVEHRFQKRLVCHQCGETKPIPRACPS
CGAEDRLAPVGPGVERMAEEVAALFPQARVAVLSSDLYASARALKEQIEAIAAGAADIII
GTQLVAKGHNFPLLTLVGVIDADLGLQGSDLRAAERTFQLMRQVSGRAGRAEKPGLALLQ
SFQPEHPVIRAILSGDEEGFWQAEAAERRAAGVPPYGRMAGIVLSGPDAQEAFDLGAALA
RQDAPLRRIGAQVFGPAPAPIARIRGRHRVRLLVKADKSAPLQAALKLWVAQVKLPANLR
LQIDIDPQSFY
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcccgaattctacgacgaaggtgcgctggtggcggtgctgaccacgcagccg
ctggaccggacgctggattaccgcgcgcccgagggcggatgccatcttggcgcctttgtc
gaggtgccgctgggcccgcgcaaggtgctgggcgtggtctgggggccgggcgagggcggc
tatgatctgggcaaggtgcgcccggtgaaccgggtgctggacgccgcgccgatgcgcgcg
gagatgcgggcgtttctgacccgcgcggccgaatacacgctgacgccgatgccggcgatg
ctgcggttggcgacgcgggcgccggggctgggcggggctgtgtcgatgcgcaaggtgttt
cgcctggggcagggccggccggaccgcgagacggaggcgcgcggccgggtgctggcggtg
ctggaggaatatggcgggctggccttcaccctgagcgagctgtcggggatggcgggggtt
tcgacgtccgttatcaaggggctggtcaagcagggcgtggtgtcagaggaagacacgccg
cgcgacatgccctatccgcggctggaccccgcgatggcgggccatgcgctgaccggcgat
caggcggcggcggcggcggcgctgcgcgcgggcgcggcgagcggctgctatggcgcgacg
ctgctgaagggtgtcacgggatcgggcaagaccgaggtttacctcgaggcggtggccgaa
tgtctggcgcaggggcggcaggcgctggtgcttttgcccgagatcgcgctgacggcgggg
tttctgacccgggtggaggcgcggttcggcgccaagccctccgagtggcattcgggcgtg
acgatgacagagcggcggcgctgctggaagatggccgggcagggcggcgcgcagctgatc
gtcggcgcgcggtcggcgctgtttctgccgttccgcgatctggggctgatcgtggtcgat
gaagagcatgacacgtcttacaagcaagaggatggcgcgctttacaatgcgcgggacatg
gcggtgctgcgtgcctcgctttgttcggcgcaggtggtgctggcctcggccacgccgtcg
ctggaaagctgggccaatgtcgaggcgggcaaataccggcggctggatctgacatcccgt
ttcggggccgccgtgctgcccgagatgcgcgcgatcgacatgcgcgaggaagacctgccg
gggaaccgctggatttctccgacgctacagcgcgaggtcacggcgcgtatggcggcgggc
gagcaggcgctgctgtttctgaaccggcgcggctatgctccggtgacgatctgccgggcc
tgcggccatcagatcggctgcgatcattgcgatgcgcggatggtcgagcaccggtttcag
aaacgccttgtctgccatcaatgcggagaaaccaagccgatcccgcgggcctgcccgtcc
tgcggggccgaggaccggctggcgcccgtggggccgggggtggagcggatggccgaagag
gtggcggcgctgtttccgcaggcgcgggtggcggtgctttcatccgatctctatgcctcg
gcgcgggcgctgaaggagcagatagaggcgattgcggcgggtgcggctgatatcatcatc
ggcacccagctggtggccaaggggcataattttccactgctgacgcttgtgggggtgatc
gacgccgatctggggctgcaggggtcggacctgcgcgcggcagagcggacgtttcaactg
atgcggcaggtatcgggccgggcgggccgggcggagaagcccggcctggcgctgttgcag
agctttcagccggaacacccggtgatccgtgccattctgtcgggcgatgaggaagggttc
tggcaggccgaggcggccgagcggcgggcggcgggggtgccaccctatggccgtatggcc
gggatcgtgctgagcggccccgatgcgcaggaggcgttcgatctgggcgcggcgctggcg
cggcaggatgcgccgctgcgccggatcggggcgcaggtctttggcccggcgcccgcgccg
atcgcacggatccgcgggcggcaccgggtgcggctgctggtgaaggcggacaagagcgcg
ccgttgcaggcggcgctgaagctctgggtggcgcaggtgaagctgccggctaatctgcgg
ctgcagatcgatatcgacccgcagagcttttactga
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