KEGG   Coprococcus sp. ART55/1: CCU_18140
Entry
CCU_18140         CDS       T02583                                 
Name
(GenBank) exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
coo  Coprococcus sp. ART55/1
Pathway
coo03410  Base excision repair
coo03430  Mismatch repair
coo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:coo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CCU_18140
   03430 Mismatch repair
    CCU_18140
   03440 Homologous recombination
    CCU_18140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:coo03400]
    CCU_18140
DNA repair and recombination proteins [BR:coo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CCU_18140
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CCU_18140
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CCU_18140
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 TPP_enzyme_N DUF34_NIF3
Other DBs
NCBI-ProteinID: CBK83315
UniProt: D5HEI2
LinkDB
Position
complement(1883302..1885185)
AA seq 627 aa
MTLTPEQKDIIDKYVKKPEWRVAGKRADFNAIGERFGVSPVVARVITNRGVTGEKAIAMY
LDGDWDSMHDPALMKDMVEAGEIIKEKLSDNRRIRIISDYDVDGVTSNYILLLGLRRTWA
ALHGSCADDCTVVDYDIPHRVHDGYGINKRLIDAAIADGVDTIITCDNGIAAIEQVRYAK
ERGLTVIVTDHHQIPFEESDGGERVYMLPQADAVIDNQRQDCEYPFKGLCGAGVAFKLIQ
YMYRICGIAESEVNEFMEILGLATNCDMMDLVDENRIYVKYALESLKDSRNPGLNALMRL
SGRNEKKISTYDLGFLIGPCINAAGRLGDAKQSLEFLLERDPNVAEARARELLAVNNERK
NMTEAGARHITDMLETATVNGEFGQAATLADKVLVVYIPAVHESVVGIIASRLKEAYTRP
AMVFTDAETPGILKGSGRSIDSYNMFEELNRFREMFTAFGGHAMAAGFSIEKERLDELRR
KLNEAAVLTDEDITPKLMIDVAMPLAYNSIELTEQIERLEPYGKGNRKPLFAQAAVPVRR
AQILGRNKNLLKLQLDTGYGRCVDAIDFDPDTFVNNIKQWFGEDECVKMLNGQPNAVVID
VAYYPTINEYMGRRSLQMKMEAYNKGI
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgacattgacaccggagcagaaggatataatagataaatatgtgaagaagccagagtgg
agagtggcgggcaaaagagcggactttaatgccataggcgagaggttcggtgtgagtcct
gttgtggcgagggttatcacgaacagaggagtcaccggggagaaagccatagctatgtac
cttgatggcgactgggattccatgcacgatccggcactgatgaaggatatggtggaagcc
ggtgagataataaaggaaaagctcagcgataacaggagaataaggataatctcggactac
gacgtggacggagttacctccaattatatattgcttctcggtcttcggagaacatgggcg
gcgctgcacggaagctgcgctgatgactgcaccgtggtggattacgacattccacatcga
gtgcatgatggatacggaataaataaaagacttatagatgccgccatagcggatggtgtt
gatactatcataacctgcgacaatggaatagcggcgatagaacaggtgagatatgcgaag
gagcgcgggcttacggtcatcgtcacggatcaccatcagatcccatttgaggagagtgat
ggcggcgagcgggtatatatgctgccccaggcggatgcggtcatagacaatcagaggcag
gactgtgaatatccattcaaggggctgtgcggggccggcgttgcgttcaagctcatccag
tacatgtacaggatatgcgggatagccgagagcgaggtaaatgaattcatggagatcctg
gggctggctaccaactgtgacatgatggatctggtggatgagaacagaatctatgtaaaa
tatgcccttgaaagtctgaaggacagccgcaatccggggctgaatgccctcatgaggctc
agcggcagaaatgagaagaagatatcaacgtatgatctgggatttctgatagggccgtgc
atcaatgcggcgggaagactgggggatgcgaaacagagccttgagttcttgcttgagaga
gatccaaatgtcgccgaggcaagggctagggaactgctggctgtcaacaatgagagaaag
aacatgacggaggccggagcccggcatatcacagatatgcttgagacagccactgtgaac
ggagagttcggacaggcggctacccttgcggacaaggtgcttgtggtgtatataccggct
gtacatgagagcgttgtgggaataatcgccagcaggctcaaggaggcatacacaagacct
gcgatggtgttcacggacgcagagacgccggggatactgaaaggatcgggaagatccata
gacagctacaacatgttcgaggagctgaaccggttccgggagatgttcactgcatttggc
ggacatgccatggcggcgggcttttccatagagaaggagaggcttgacgagctgaggcgg
aagctcaatgaagcggcggtgctgacggatgaagatataacacctaagctgatgatagat
gtggccatgccgctggcgtacaacagcatagagctgacggaacagatcgagaggcttgaa
ccatacggaaagggtaacaggaaaccgctgtttgcacaggcggcagtaccggtgcgaagg
gcgcagatacttggaagaaacaaaaatcttctgaagctccagcttgataccgggtacgga
aggtgcgtggatgccatagattttgatccggatacatttgtgaataacataaaacagtgg
tttggagaggatgaatgtgttaaaatgttaaatggtcagccgaacgccgtagtgatagat
gtcgcatactatccgaccatcaatgaatatatgggaagacgttcgctccagatgaagatg
gaggcctataacaagggaatataa

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