Coprococcus sp. ART55/1: CCU_18140
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Entry
CCU_18140 CDS
T02583
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
coo
Coprococcus sp. ART55/1
Pathway
coo03410
Base excision repair
coo03430
Mismatch repair
coo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCU_18140
03430 Mismatch repair
CCU_18140
03440 Homologous recombination
CCU_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coo03400
]
CCU_18140
DNA repair and recombination proteins [BR:
coo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CCU_18140
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CCU_18140
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CCU_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
TPP_enzyme_N
DUF34_NIF3
Motif
Other DBs
NCBI-ProteinID:
CBK83315
UniProt:
D5HEI2
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Position
complement(1883302..1885185)
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AA seq
627 aa
AA seq
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MTLTPEQKDIIDKYVKKPEWRVAGKRADFNAIGERFGVSPVVARVITNRGVTGEKAIAMY
LDGDWDSMHDPALMKDMVEAGEIIKEKLSDNRRIRIISDYDVDGVTSNYILLLGLRRTWA
ALHGSCADDCTVVDYDIPHRVHDGYGINKRLIDAAIADGVDTIITCDNGIAAIEQVRYAK
ERGLTVIVTDHHQIPFEESDGGERVYMLPQADAVIDNQRQDCEYPFKGLCGAGVAFKLIQ
YMYRICGIAESEVNEFMEILGLATNCDMMDLVDENRIYVKYALESLKDSRNPGLNALMRL
SGRNEKKISTYDLGFLIGPCINAAGRLGDAKQSLEFLLERDPNVAEARARELLAVNNERK
NMTEAGARHITDMLETATVNGEFGQAATLADKVLVVYIPAVHESVVGIIASRLKEAYTRP
AMVFTDAETPGILKGSGRSIDSYNMFEELNRFREMFTAFGGHAMAAGFSIEKERLDELRR
KLNEAAVLTDEDITPKLMIDVAMPLAYNSIELTEQIERLEPYGKGNRKPLFAQAAVPVRR
AQILGRNKNLLKLQLDTGYGRCVDAIDFDPDTFVNNIKQWFGEDECVKMLNGQPNAVVID
VAYYPTINEYMGRRSLQMKMEAYNKGI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacattgacaccggagcagaaggatataatagataaatatgtgaagaagccagagtgg
agagtggcgggcaaaagagcggactttaatgccataggcgagaggttcggtgtgagtcct
gttgtggcgagggttatcacgaacagaggagtcaccggggagaaagccatagctatgtac
cttgatggcgactgggattccatgcacgatccggcactgatgaaggatatggtggaagcc
ggtgagataataaaggaaaagctcagcgataacaggagaataaggataatctcggactac
gacgtggacggagttacctccaattatatattgcttctcggtcttcggagaacatgggcg
gcgctgcacggaagctgcgctgatgactgcaccgtggtggattacgacattccacatcga
gtgcatgatggatacggaataaataaaagacttatagatgccgccatagcggatggtgtt
gatactatcataacctgcgacaatggaatagcggcgatagaacaggtgagatatgcgaag
gagcgcgggcttacggtcatcgtcacggatcaccatcagatcccatttgaggagagtgat
ggcggcgagcgggtatatatgctgccccaggcggatgcggtcatagacaatcagaggcag
gactgtgaatatccattcaaggggctgtgcggggccggcgttgcgttcaagctcatccag
tacatgtacaggatatgcgggatagccgagagcgaggtaaatgaattcatggagatcctg
gggctggctaccaactgtgacatgatggatctggtggatgagaacagaatctatgtaaaa
tatgcccttgaaagtctgaaggacagccgcaatccggggctgaatgccctcatgaggctc
agcggcagaaatgagaagaagatatcaacgtatgatctgggatttctgatagggccgtgc
atcaatgcggcgggaagactgggggatgcgaaacagagccttgagttcttgcttgagaga
gatccaaatgtcgccgaggcaagggctagggaactgctggctgtcaacaatgagagaaag
aacatgacggaggccggagcccggcatatcacagatatgcttgagacagccactgtgaac
ggagagttcggacaggcggctacccttgcggacaaggtgcttgtggtgtatataccggct
gtacatgagagcgttgtgggaataatcgccagcaggctcaaggaggcatacacaagacct
gcgatggtgttcacggacgcagagacgccggggatactgaaaggatcgggaagatccata
gacagctacaacatgttcgaggagctgaaccggttccgggagatgttcactgcatttggc
ggacatgccatggcggcgggcttttccatagagaaggagaggcttgacgagctgaggcgg
aagctcaatgaagcggcggtgctgacggatgaagatataacacctaagctgatgatagat
gtggccatgccgctggcgtacaacagcatagagctgacggaacagatcgagaggcttgaa
ccatacggaaagggtaacaggaaaccgctgtttgcacaggcggcagtaccggtgcgaagg
gcgcagatacttggaagaaacaaaaatcttctgaagctccagcttgataccgggtacgga
aggtgcgtggatgccatagattttgatccggatacatttgtgaataacataaaacagtgg
tttggagaggatgaatgtgttaaaatgttaaatggtcagccgaacgccgtagtgatagat
gtcgcatactatccgaccatcaatgaatatatgggaagacgttcgctccagatgaagatg
gaggcctataacaagggaatataa
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