Colwellia sp. Arc7-635: EKO29_00020
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Entry
EKO29_00020 CDS
T06022
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cov03032
]
EKO29_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_00020 (gyrB)
Enzymes [BR:
cov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EKO29_00020 (gyrB)
DNA replication proteins [BR:
cov03032
]
Prokaryotic type
DNA Topoisomerases
EKO29_00020 (gyrB)
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EKO29_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF3108_like
CN_hydrolase
Motif
Other DBs
NCBI-ProteinID:
AZQ82599
UniProt:
A0A3S9Q0X2
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All DBs
Position
3613..6057
Genome browser
AA seq
814 aa
AA seq
DB search
MTIENEYDSASIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVLDNSIDEALAGHCSD
IIVKIHLDGSVSVRDDGRGIPTELHPEEGISAAEVIMTVLHAGGKFGGEDSGYKVSGGLH
GVGISVVNALSHKLKLNIRRDGKLFEQFYYHGVPAEPLKVVGESDKTGTEVRFWPSEDTF
TDVLFHYDLLVKRIRELSFLNSGVSIRLIDEREAGKEDHFHFDGGIQAFVDYLNTNKTPV
NEEIFYFDLEREDGIIVEVAMQWNDGFQESIHCFTNNIPQRDGGTHLSGFRTALTRTLNS
YMVKEGLNKTKKGGNTETSASGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKTAVE
QAMGEKLGEYLLEKPSVARTIIMKIVDAARAREAARKAREMTRRKGVLDIAGLPGKLADC
QEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMISSQEVGTL
ITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIMERGYIYIA
QPPLYKVKKGKQERYIKDDEGLTEYLTTLALENAEVHVNESAPAISGLSLEKLVKQFRKT
HETIKRVSRLIPADILEKMIYGDLISTEDFNDKDKVENWTANLLKQLSDQDGNGSIYTVE
VKQDQERNVYYPSFNVRKHGIDTVYDCNYEFFDSKEFENIQNLNKAINGLMEDGAYVKRG
EKIKPITEFEEALNWLMAESKRGQYIQRYKGLGEMNPSQLWETTMDPETRRMLQVTIEDA
IAADQLFTTLMGDHVEPRRHFIEENALKVANLDV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagaaaatgaatatgactcggcaagtataaaagtacttaaaggcttagatgca
gttcgcaaaagaccagggatgtatataggtgataccgatgatggcactggccttcatcat
atggtatttgaggtgttggataactcaattgatgaagctcttgcaggtcactgtagtgat
attattgttaaaattcacttagacggttcagtgtcggttagagatgacggacgaggaatt
ccaactgaacttcatccagaagaaggtatttcagcagcagaagttatcatgacagtattg
catgctggtggtaagtttggtggcgaagactcgggctataaagtttcgggtggtttacac
ggtgttggtatatctgtagtaaatgctttaagtcacaaattaaaattaaatattcgaaga
gacggtaaactattcgaacaattctattatcacggtgttccagctgagcctttgaaagtt
gttggtgaaagtgacaaaactggtacagaagtaagattttggccaagtgaagatactttc
actgatgtactatttcactatgacttattagtgaaaagaatccgtgagttatcatttttg
aactctggtgtttctattagacttattgatgaacgagaagctggtaaagaagatcacttt
cactttgacggtggtattcaagcatttgttgattatttaaataccaataaaacgccggtt
aatgaagaaatattctatttcgatctagaacgtgaagatggaattattgttgaagtagca
atgcaatggaatgatggtttccaagaaagcatccattgttttactaacaatattccacaa
cgtgatggtggtactcatttaagtggttttagaacagccttaactcgtacgcttaatagc
tacatggttaaagaaggtcttaataaaactaaaaaaggtggtaatactgaaacaagtgct
tcaggtgatgatgcacgtgaaggtcttactgccgtaatttcagttaaagtacctgatcca
aaattctcttcacaaacaaaagataaacttgtttcatctgaagttaaaactgcagtagaa
caagcgatgggcgaaaaactaggtgagtatctattagagaaaccatcagttgctcgtact
atcatcatgaaaattgttgatgctgcacgtgctcgtgaagctgcgcgtaaagcaagagag
atgacacgtcgtaaaggtgttttagatatcgctggtttaccgggtaaattagccgattgc
caagaaaaagatcctgcactttctgaactatatattgtggaaggggactctgctggtggt
tcagccaagcagggaagaaatcgtaaaaaccaagctatcttgccattgaaaggtaaaatt
cttaacgtagaaaaagcgcgttttgataaaatgatatcttcacaagaagttggtacgcta
attactgcattaggttgtggtattggtcgcgacgaatataacccagataaacttcgttat
catagcattatcatcatgaccgatgccgatgtcgatggttctcatatccgaacattatta
ctgacatttttctatcgtcaaatgcctgaaataatggaacgtggttacatctatattgct
caaccgccactttataaagtgaagaaaggtaagcaagaacgttatattaaagatgatgaa
ggcttaactgaatacttaacgacacttgctttagagaatgctgaagttcatgtgaatgaa
tcagcaccggccatatcgggtttatctctagaaaaattagttaaacagttccgtaaaact
cacgaaacaattaaacgtgtatcacgtttaataccggctgatattttagagaagatgatt
tacggtgatcttatttctactgaagactttaatgataaagacaaagtagaaaattggact
gcaaatcttcttaagcaattatcagatcaagatggtaatggttctatttacacggtagaa
gttaagcaagaccaagagcgtaatgtttattacccaagctttaatgttcgtaagcatggt
attgatacggtttatgattgtaactatgaattttttgattctaaagaatttgaaaatatt
cagaatctgaataaggcgattaatggtcttatggaagatggtgcttatgttaaacgtggt
gaaaaaattaaacctatcactgagtttgaagaagccttaaattggttaatggcagaatca
aaacgtggacaatacattcaacgttataaaggactgggtgaaatgaaccctagccaatta
tgggaaaccaccatggacccagaaacacgtagaatgctacaagtaacgattgaagatgct
attgctgccgatcagttgtttactaccttaatgggtgatcatgttgaaccacgcagacac
ttcattgaagagaatgcacttaaagttgctaacttagatgtctag
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