Cupriavidus oxalaticus: E0W60_27655
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Entry
E0W60_27655 CDS
T06004
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cox
Cupriavidus oxalaticus
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cox03009
]
E0W60_27655 (rsmB)
Enzymes [BR:
cox01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
E0W60_27655 (rsmB)
Ribosome biogenesis [BR:
cox03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
E0W60_27655 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_25
Methyltr_RsmF_N
NusB
Methyltransf_31
FtsJ
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
QBY54740
UniProt:
A0A4P7LFA6
LinkDB
All DBs
Position
2:complement(3634989..3636416)
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AA seq
475 aa
AA seq
DB search
MRLPPDSLAFQMLGAAAAVRAVSEGTALPQAIEDAAAQLRLDRVRDAATRGALQDIAYRT
MRQFGTARALVTKLVTRPPGAQVDSLLAVALALLLEQAPGQRQDKDSQDAAQGATPGTPG
RAGYSTFTVVDQAVSAAASEPKTAHARGLVNAVLRRFLRERKALLAEVNRDEQARWNLPP
WWLRMLREAYPEQWTDLAASVNVRPPMTLRVNTARVSVKQYQTDLANAGLAGTVVGPQAV
RLVRAVPVTQLPGFAEGTVSVQDAGAQLAAPLLEVADGMRVLDACAAPGGKTGHLLELAD
IDVTAVESDPQRATRINENLARLGTQARIVVGDASRPADWWDGQPFDRILADVPCSASGI
VRRHPDIRWLRRETDIAKLITEQRRIVSQLWPLLKPGGILVYVTCSIFPTEGEEQARWFG
AQLADAIRLQAPGQLLPGTRTTTHSAGEQGEKDPGHASLPSDHDGFFYARFQKRA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcctcccgattcgcttgccttccagatgcttggcgccgccgccgcggtacgc
gccgtcagcgaaggcaccgccttgccgcaggcgatcgaagacgccgccgcgcagttgcgc
ctggaccgcgtgcgcgatgccgccacgcgcggtgcgctgcaggacatcgcttaccgcacc
atgcgccagttcggcaccgcgcgtgcgctggtgacgaagctggtcacgcgcccgcccggc
gcgcaggtggactcgctgctggcggtggcgcttgcgctgctgctcgagcaggcaccgggc
cagcggcaggacaaagacagccaggacgcggcacagggcgcgacgccgggcaccccgggc
cgcgccggctacagcaccttcacggtggtcgatcaggcggtcagcgcggccgcgtcggaa
cccaagactgcgcacgcccgcggcctggtcaacgcggtactgcgccgtttcctgcgcgag
cgcaaggcgctgctggccgaggtcaaccgcgacgaacaggcgcgctggaacctgccgccg
tggtggctgcgcatgctgcgcgaggcgtacccggagcagtggaccgatctcgccgcgagc
gtcaacgtgcgcccgccgatgacgctgcgcgtcaacaccgcgcgggtcagcgtgaagcaa
taccagaccgacctggccaatgccggtctcgccggcaccgtggtcggcccgcaggccgtg
cgcctggtgcgcgcggtgccggtgacgcaattgccgggcttcgccgaaggcacggtgtcg
gtgcaggacgccggcgcgcaactggccgcgccgctgctcgaggtggccgacggcatgcgc
gtgctcgatgcctgcgccgcgcccggcggcaagaccggccacctgctggagcttgccgac
atcgacgtgactgcggtggaaagcgacccgcagcgcgccacgcgcatcaacgagaacctc
gcgcgcctcggcacgcaggcccgcatcgtggtgggcgatgccagccggcccgccgactgg
tgggacggccagcccttcgaccgcatcctggccgacgtgccgtgctcggcctccggcatc
gtgcggcgccatcccgatatccgctggctgcgccgtgagaccgatatcgccaagctgatc
accgagcagcgccgcatcgtgtcgcagctgtggccgctgctcaagccgggcggcatcctg
gtctacgtcacgtgttctattttcccaacggaaggcgaggagcaggcgcgctggtttggt
gcacaactggcagatgcgatacgattgcaggcgccggggcagctgctgcccggcacccgt
acgacaacgcactcggccggcgaacaaggtgaaaaggaccctggccacgccagcctgcca
tcggatcacgatggctttttctacgcccgcttccagaaacgcgcctga
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