KEGG   Caminibacter pacificus: C6V80_03080
Entry
C6V80_03080       CDS       T06023                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
cpaf  Caminibacter pacificus
Brite
KEGG Orthology (KO) [BR:cpaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpaf03016]
    C6V80_03080 (truD)
Enzymes [BR:cpaf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     C6V80_03080 (truD)
Transfer RNA biogenesis [BR:cpaf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C6V80_03080 (truD)
 Prokaryotic type
    C6V80_03080 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: QCI27979
LinkDB
Position
558393..559448
AA seq 351 aa
MIYSHAPINFHFNKNSENFVVEEIPLYPFAHTGEWLMLKVRKKGLTTDEMLKRISSATGI
KLKEMGYAGLKDKEGMTIQWISVPRKYRDEINKFQDKQIKIVEQDLHRNKLKIGHLKGNK
FFVRLKKVLPVDAKKLDNVLKEIKKYGIPNFFGYQRFGKFGNNWEEGKAIIEGDKFVKNR
KLEKFLISAYQSKLFNDWLNERIKLSNIFDLSEKELQFAGYDKELIKFVKAQKHPFKLLP
GDVMSHYPVGKFFYLENVEDTERFLNKDITVTGLLPGKKALRAKDKAREIEEKYDELIPA
KGDRRAAWIFPEILEKNYLKDYAQYEIVFTLPKGSYATVLIDILKNGIKLS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgatatattctcatgcaccgataaactttcattttaataaaaacagcgaaaatttcgtt
gttgaggagatacctctttatccgttcgctcatacgggcgagtggcttatgctaaaggtt
agaaaaaaaggtttaacaaccgatgagatgttaaaaagaatctcaagtgctacaggtatc
aaactaaaagagatgggttatgcaggtcttaaagataaagaaggtatgactattcaatgg
ataagcgtgccgagaaaatatagagacgaaataaataaatttcaagataaacaaattaaa
atcgtcgagcaggatttgcatagaaataagcttaaaattggacatttaaaaggtaataag
ttttttgttaggttaaaaaaagtacttcctgtggatgcaaagaagcttgataatgtgtta
aaagagattaaaaaatacggaattccgaactttttcggatatcaaagattcggaaaattc
ggaaataactgggaagagggcaaggctataatcgaaggtgacaaattcgtaaagaacaga
aaacttgaaaaatttttaataagcgcttatcaatcaaaactctttaacgattggctaaat
gagagaataaaacttagtaacatttttgatttaagcgaaaaagagcttcagtttgccgga
tatgataaagagcttataaagtttgtaaaagctcaaaaacatccgtttaaacttttaccg
ggagacgtgatgagtcactatccggtgggtaaattcttttatttggaaaatgtagaagat
accgaaagatttctaaataaagacattaccgtaacgggtcttttgccgggtaaaaaagct
ctaagagctaaggacaaagcaagagaaatagaagaaaaatacgacgagcttattccggca
aaaggcgatagaagagctgcgtggatttttcctgaaatattagagaaaaattatctaaaa
gattatgcacaatacgaaatagtttttacgcttccaaaaggctcttacgctaccgtttta
atagatattttaaaaaacggtattaaattatcttga

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