Caminibacter pacificus: C6V80_07180
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Entry
C6V80_07180 CDS
T06023
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cpaf
Caminibacter pacificus
Pathway
cpaf03030
DNA replication
cpaf03430
Mismatch repair
cpaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6V80_07180
03430 Mismatch repair
C6V80_07180
03440 Homologous recombination
C6V80_07180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpaf03032
]
C6V80_07180
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_07180
Enzymes [BR:
cpaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6V80_07180
DNA replication proteins [BR:
cpaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C6V80_07180
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C6V80_07180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QCI28754
LinkDB
All DBs
Position
complement(1342282..1343199)
Genome browser
AA seq
305 aa
AA seq
DB search
MYKKDFDKLAQYPHFLLFYGNEFYLQEYEKIIQEKFKNANILKMYYDEYDFEIAKTHLNE
TSLFGGESVLIIKHNKIPPNIDKLKKYTKNSYLFFFYYGNKRPEVFGKNFVRFFEPNLRD
KVELINKIANEKKVNITQEAKLFLAKSIEPSFLRSEIEKLSLYSDNIDVDVVKELVFIYK
EESFEDLIVSILRGEDFFEKLNTMLEIVDFKRIIPATIRYVRDLYSYNLYIKKTGLSSLE
GFLGYKLPFDIEKQRVDLAVRLKEKDYYELLKHLLNFELQMRNSEKNKEAIFWEAMSYLK
TFKSF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaagattttgataaattggcacaatatccgcactttttgttgttttacggt
aacgagttttatctgcaagagtacgaaaaaataattcaagaaaaattcaaaaacgcaaat
attttgaagatgtattatgacgagtatgattttgagatagcaaaaactcacctaaacgaa
acctctttattcggaggagagagcgttttgataataaaacacaataaaattcctccgaat
atagataaattaaaaaaatatacgaaaaactcttatcttttctttttttattacggcaat
aaaagaccggaagttttcggcaaaaatttcgttagatttttcgagcctaatttaagagat
aaagtcgaattaataaataaaatcgcaaatgaaaaaaaagtaaatataacccaagaagca
aaactttttttagcaaaatcgatagagccgtcttttttgagaagcgagatagaaaaatta
tcgttatatagtgataatattgacgttgacgtagtaaaagagcttgtttttatttataaa
gaggagtcttttgaggatttgatagtatcgattttaagaggtgaagatttttttgaaaaa
ctaaacaccatgctcgaaattgtggattttaaaagaataattcctgcgactatcagatat
gtcagagatttgtattcgtataatttatatatcaaaaaaaccggtctttcgtctcttgaa
ggttttttggggtataagcttccttttgatattgaaaaacaaagagtggatttggctgta
agacttaaagaaaaagattattacgaacttttaaaacatctgttaaatttcgaacttcaa
atgagaaatagtgaaaaaaacaaagaagccatattttgggaagcgatgagttatctcaaa
acttttaagagcttttaa
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