Carica papaya (papaya): 110815317
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Entry
110815317 CDS
T05151
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpap01009
]
110815317
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110815317
Enzymes [BR:
cpap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
110815317
Protein phosphatases and associated proteins [BR:
cpap01009
]
HAD phosphatases
Fcp/Scp phosphatases
110815317
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110815317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
110815317
NCBI-ProteinID:
XP_021898748
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSKDHSVSIKDAIYKLQLSLLDGTKDESQLFAAGSLMSRSDYEDVVTERTISNLCGYPLC
NNSLSSDPQRKGKYHISLKEHKVYDLQEVRRFCSSSCLIESRAFSGSLQEERCSILNAVK
LNEILDMFEDLSLDNSAEDLKEIGDLGLSRLKIQENTETKVGEVPLDEWLGPSNAVEGYV
PKRDRKSKAPHARYSKDESNSNHAKPSTREDFPINKMGFMSAIITSDEYGTSNERSALLE
ACSTKMLEEQKMKGICRDLEQQAVVSESPSAPCRKDSGRKSKESRGEVKIIAEDEHTFEE
TYDGSVTDNAQEENRSLFKKAGGSSGMLKPSLKSSGAKKLGRSVTWADEKTDCVGSGKLC
ELRDMKDTTVSSQAYGGVDKYVVDSMARLESAEACAIALSQAVEAVASGNSDVSDIVSEA
GIIILPHPHDINGGEPVDDGEQVEDVDMLEPEPTSLKWPLKPGIPHSDVFDPEDSWFDAP
PEDFSLTLSTFATMWNTIFGWITSSSLAYIYGKDESFHEDYFFINGKEYPRKIVLGDGRS
SEIKETLAGCLGRALPGLVADLGLPTSISDIEKGLGCLLDTMCFTDALPAFRMKHWQVIV
LLFLDALSVCRIPAISPYMTNGRMLLYKVLNGAQMSMEEYEIMKDLLIPLGHAPQFSMQS
GD
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggatcattcagtcagcattaaggatgcaatatacaagctgcagctctctctt
ctggatggcactaaagatgaatctcagctctttgcagctggctccttgatgtctcgtagt
gactatgaagatgttgtcactgagcggacaatatcaaacctttgtggttaccctctctgc
aacaattcgctttcatctgatcctcagagaaagggaaaataccacatttcgttgaaggag
cataaagtctatgacttacaggaggtcagaaggttttgttcctcaagttgtctcattgag
agtcgcgctttttcagggagtttgcaggaagagcgatgttcaatcttgaatgcagttaaa
ctaaatgaaattctagatatgttcgaagatttgagtttggataattctgcagaggactta
aaggagattggggaccttgggttgtctagactgaagattcaggagaatacagagacaaag
gttggggaagtgcctttggacgagtggttggggccctctaatgcagtagaaggctatgtt
ccaaaaagggaccgtaaatccaaggctccacatgcaagatatagcaaagatgagtctaat
tctaatcatgctaagccaagtaccagggaagattttcccattaacaagatgggtttcatg
agtgctataatcaccagtgacgaatatggaacttctaatgagcgatcggctttattagag
gcctgttctactaagatgcttgaagaacaaaaaatgaaaggaatttgtagagatttggag
cagcaggctgttgtatcagaatctccatctgctccttgtagaaaagattctggtagaaag
tcaaaagaatcaagaggggaagttaaaatcattgcagaagatgagcatacatttgaagaa
acttatgatggttctgttacggataatgctcaagaagaaaataggtctcttttcaaaaaa
gcaggtggatcaagtgggatgctcaaaccttctctcaaatcttctggtgcaaaaaaactt
ggtcggtcagttacttgggctgatgaaaaaactgattgtgttggaagtggtaagctttgt
gagcttagggacatgaaagatacaacagtaagctcgcaggcatatggtggtgtagacaag
tatgtcgttgatagcatggcacgtcttgaatcagcagaagcgtgtgctatagcattgagc
caggcagtggaggctgttgcttctgggaattcagatgttagtgatattgtgtctgaagct
gggataattatattgccacacccgcatgatatcaatggcggagagcctgttgatgacgga
gagcaagtggaggatgttgatatgcttgagcctgaaccaacttctctgaagtggcctcta
aagccgggaattccacattctgatgtatttgaccctgaagattcttggtttgatgctcca
ccagaggatttcagtttaactttatcaacctttgcaacaatgtggaacacaatctttgga
tggataacatcttcttctttggcttatatttatgggaaggatgaaagttttcatgaggat
tatttttttattaatgggaaggagtacccccggaagattgtcctgggagatggtcgttct
tctgaaatcaaggaaactcttgctggttgtcttggtcgggctctgcctggacttgtggct
gatcttgggctgccaacctcaatatctgatattgagaagggattggggtgcttgttggat
acaatgtgtttcactgatgcacttccggcattcagaatgaagcattggcaagttattgtt
cttctttttctggacgctttatctgtgtgtcggatccctgcaatttctccttacatgacg
aacggaaggatgctgctttataaggtcttgaatggtgcgcagatgagcatggaagagtat
gagataatgaaggatctcctaataccgcttggccatgcacctcagttctccatgcaaagt
ggggattaa
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