KEGG   Carica papaya (papaya): 110816605
Entry
110816605         CDS       T05151                                 
Name
(RefSeq) SKP1-like protein 13
  KO
K03094  S-phase kinase-associated protein 1
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03083  Polycomb repressive complex
cpap04120  Ubiquitin mediated proteolysis
cpap04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110816605
   04120 Ubiquitin mediated proteolysis
    110816605
  09126 Chromosome
   03083 Polycomb repressive complex
    110816605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpap04131]
    110816605
   04121 Ubiquitin system [BR:cpap04121]
    110816605
   03036 Chromosome and associated proteins [BR:cpap03036]
    110816605
Membrane trafficking [BR:cpap04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    110816605
Ubiquitin system [BR:cpap04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     110816605
   Cul7 complex
     110816605
Chromosome and associated proteins [BR:cpap03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     110816605
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     110816605
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 110816605
NCBI-ProteinID: XP_021900551
LinkDB
Position
Unknown
AA seq 169 aa
MASGSGNKKTITLITGDGKYVEVEEKVAMEFAIVKSFFEDNSFASSTKKFMIPVPNVSAE
MLEQIVSYVNGILPLRSKTGGEKEIEAYNRAFVEQLSLENLKDMMLAANYLDIRDLIDLL
CQGVADGIKNKSVEFVRKFFGIENDYTEEEEAELRRQNAWAFEDVDPDP
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcgtcaggtagcgggaacaagaagactatcaccttgataaccggagacggcaagtac
gtcgaagtggaggagaaggtcgccatggagttcgccatcgtcaaatcctttttcgaggat
aattcctttgcgtcatcgactaagaagttcatgatacctgtccctaacgtctccgccgaa
atgttggagcagattgtctcctatgtcaacggcatcctcccgctccgatcgaagactggc
ggagagaaggagatcgaagcatacaaccgtgcttttgtggagcagctgagcctggagaac
ttgaaggatatgatgttggctgcaaactatctcgacatcagggacctaatcgatttgctt
tgtcagggcgtggccgatggaatcaagaataagagcgtggagtttgtgaggaagttcttc
gggatcgaaaatgattatacggaagaggaggaggctgagcttcggaggcagaacgcttgg
gcttttgaggatgtagatcctgatccttaa

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