Carica papaya (papaya): 110817478
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Entry
110817478 CDS
T05151
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
3.6.4.13
]
Organism
cpap
Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110817478
03009 Ribosome biogenesis [BR:
cpap03009
]
110817478
Enzymes [BR:
cpap01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
110817478
Spliceosome [BR:
cpap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110817478
Ribosome biogenesis [BR:
cpap03009
]
Eukaryotic type
Pre-60S particles
Helicases
110817478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-RVT
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
110817478
NCBI-ProteinID:
XP_021901712
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MAESFVFEPPSDEEAENSQPEVEEEEEEQGGGEGEGEEEEEKPSKRRSVQSPWDFASYSE
SVAEEHARRSTTSIDFKISKALQQRSAPISTQPDHDESSDSEPDQQEDYKSEDEGNAAGN
SNDAKSFFAPVEGVSFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDIC
GSAITGSGKTAAFALPTLERLLFRPKRIPAIRVLILTPTRELAVQVHSMMEKLAQFTDIK
CCLVVGGLSTKVQEVALRAMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLEL
GFSAEIHELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSADPSAKRPVTLTEDS
GHCCVAVSKNLDDWELEEFENFLFMMIADFWTRNNSDQQLSFPFETIWKTMAPPRIAFFS
WEVAKEKILTLDNLMKRGRTLVNRCVEYDLQLDINGVMAGSIHREFLAWEAVSVGHFSKI
NLHCLFSGTKQAAHRLKILFGLAGMKAAELHGNLTQAQRLDALEIFRKQQVDFLIATDVA
ARGLDIIGVQTVINYACPRDLTSYVHRVGRTARAGREGYAVTFVTDSDRSLLKAITKRVG
SKLKRRIVAEQSISKWSQIIDQMEEQVAAILEEEREERALRKAEMEATKAENMIAHQDEI
YSRPKKTWFLTEKEKKLAAKTEKASLGKGKSSGHEVISAEQAEDLKMKEKRKREREKNLP
RKKRRRLEAVREMLEDENQMEKPEGGDKSKKEKNGISLVDLAYRRAKALKAKAKAGKKEE
ANRKSKRPAQRTQSRTDEMRELFQSDMSEKKQKRNSGGMGKKKSKNSFKSKSRYGSNYKF
FPRHSSSICCVFVILCS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagctttgtgttcgaacctccaagcgacgaggaagccgaaaattcgcagcct
gaagtggaggaggaagaagaagagcaggggggaggagagggagagggggaagaggaagaa
gagaagccctcaaaacgacgtagcgttcaatccccttgggactttgcttcttattcagag
tccgtggccgaagaacacgctcgccggagcaccacgtctatcgatttcaagatatccaaa
gctcttcagcaacgatctgccccaatctccacccagcctgatcacgatgaaagctccgat
tctgaacccgaccaacaggaggattacaaatctgaagatgaaggtaatgctgctggtaat
tcgaatgatgctaagtcgttttttgcgccagttgaaggtgtatcgtttcatgcaaattcg
ttcatggagcttaatctctctcgtcctcttcttcgagcttgtgaagcactggggtactct
aagcctactccaattcaggcagcatgtatacctttagcacttacaggccgtgatatttgt
gggagtgccataactggttctgggaagacggctgcctttgcacttcccacgctagaaagg
ttattatttcgccccaaacgcattcccgctatccgggtccttattcttactccaacaaga
gagttggcagttcaggttcacagtatgatggagaaacttgctcaatttacagacattaaa
tgttgcttggttgttggagggctttcaacaaaggtgcaagaggtagctttgagagcaatg
ccggatattgttgtggccactcctggtcgcatgatagatcatttgcgtaattctatgtct
gtggatttggatgatcttgcagttttaattcttgatgaggcagatcgtcttctggagctt
ggatttagtgctgaaatacatgaactggttcgcctgtgtcccaaaaggagacagacaatg
ctattttcggctacaatgacagaagaagtcaatgaacttatcaaactttctctgactaaa
ccattgcgtctctcagctgatccatctgcgaaacgaccagtgacattgactgaggattct
ggtcactgttgtgttgcggttagcaagaacttagacgattgggagttggaggaatttgag
aatttcctctttatgatgattgctgatttttggactcggaacaactctgatcagcaatta
tcatttccgtttgaaaccatatggaaaacaatggctccccccaggattgctttcttttca
tgggaagtggctaaggagaaaattctgactttggataatttgatgaaaagaggtagaact
ttggtcaacagatgtgtggaatatgatctacagcttgatattaatggggtaatggcgggc
tctattcatagagaatttttggcttgggaagctgtttctgtaggccacttttctaaaata
aatttacattgtcttttcagtggaacaaagcaagctgcacataggttgaagattttgttt
ggattagctggtatgaaagcagctgaacttcatggaaatcttactcaagcccagcgtctt
gatgccttggaaattttcaggaagcaacaagtggattttctgattgcaacagatgtggca
gctcgtggacttgacataattggggttcaaacagttataaactatgcatgccctcgtgac
ctcacaagctatgttcatcgtgtgggtcgcacagccagagctggcagagaaggatatgcg
gttacgtttgtgacggatagtgatcgttctcttttaaaagctataactaaaagagttggt
tcaaagttgaagagaagaattgttgctgagcaatcaatcagcaagtggtcacagataatt
gatcaaatggaagagcaagtggcagcaattcttgaagaagagagggaggagcgagcccta
aggaaagctgaaatggaagcaacaaaggcagaaaacatgattgcacatcaagatgaaata
tattcccgccctaaaaaaacctggtttttgacagagaaggagaaaaagcttgcagcaaag
acagaaaaggcatctttagggaaaggaaaaagttctgggcatgaggtaataagtgctgaa
caagcagaggacctgaaaatgaaagaaaagagaaagcgggaacgtgagaaaaatctgcct
aggaaaaagcgtcgaaggttggaagcagtccgagagatgttggaagatgaaaatcaaatg
gaaaaaccagaaggtggtgataaaagtaagaaagaaaagaatggtatatcattggttgac
cttgcttatcgacgggcaaaggctttaaaagcaaaggccaaagctggcaagaaagaggag
gctaacaggaaatcaaaacgtcctgcccaaagaacacagtcaaggacggacgagatgaga
gagctcttccagagcgatatgagtgagaagaaacaaaagagaaatagtggtggcatgggg
aagaagaagtcaaagaactcatttaagagcaaatcacggtatggatcaaactataaattt
ttcccccgtcattctagtagtatttgttgtgttttcgtaatattatgttcttga
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