KEGG   Carica papaya (papaya): 110817478
Entry
110817478         CDS       T05151                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110817478
   03009 Ribosome biogenesis [BR:cpap03009]
    110817478
Enzymes [BR:cpap01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     110817478
Spliceosome [BR:cpap03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    110817478
Ribosome biogenesis [BR:cpap03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110817478
SSDB
Motif
Pfam: DEAD Helicase_C zf-RVT ARTD15_N AAA_22
Other DBs
NCBI-GeneID: 110817478
NCBI-ProteinID: XP_021901712
LinkDB
Position
Unknown
AA seq 857 aa
MAESFVFEPPSDEEAENSQPEVEEEEEEQGGGEGEGEEEEEKPSKRRSVQSPWDFASYSE
SVAEEHARRSTTSIDFKISKALQQRSAPISTQPDHDESSDSEPDQQEDYKSEDEGNAAGN
SNDAKSFFAPVEGVSFHANSFMELNLSRPLLRACEALGYSKPTPIQAACIPLALTGRDIC
GSAITGSGKTAAFALPTLERLLFRPKRIPAIRVLILTPTRELAVQVHSMMEKLAQFTDIK
CCLVVGGLSTKVQEVALRAMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLEL
GFSAEIHELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSADPSAKRPVTLTEDS
GHCCVAVSKNLDDWELEEFENFLFMMIADFWTRNNSDQQLSFPFETIWKTMAPPRIAFFS
WEVAKEKILTLDNLMKRGRTLVNRCVEYDLQLDINGVMAGSIHREFLAWEAVSVGHFSKI
NLHCLFSGTKQAAHRLKILFGLAGMKAAELHGNLTQAQRLDALEIFRKQQVDFLIATDVA
ARGLDIIGVQTVINYACPRDLTSYVHRVGRTARAGREGYAVTFVTDSDRSLLKAITKRVG
SKLKRRIVAEQSISKWSQIIDQMEEQVAAILEEEREERALRKAEMEATKAENMIAHQDEI
YSRPKKTWFLTEKEKKLAAKTEKASLGKGKSSGHEVISAEQAEDLKMKEKRKREREKNLP
RKKRRRLEAVREMLEDENQMEKPEGGDKSKKEKNGISLVDLAYRRAKALKAKAKAGKKEE
ANRKSKRPAQRTQSRTDEMRELFQSDMSEKKQKRNSGGMGKKKSKNSFKSKSRYGSNYKF
FPRHSSSICCVFVILCS
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggcggaaagctttgtgttcgaacctccaagcgacgaggaagccgaaaattcgcagcct
gaagtggaggaggaagaagaagagcaggggggaggagagggagagggggaagaggaagaa
gagaagccctcaaaacgacgtagcgttcaatccccttgggactttgcttcttattcagag
tccgtggccgaagaacacgctcgccggagcaccacgtctatcgatttcaagatatccaaa
gctcttcagcaacgatctgccccaatctccacccagcctgatcacgatgaaagctccgat
tctgaacccgaccaacaggaggattacaaatctgaagatgaaggtaatgctgctggtaat
tcgaatgatgctaagtcgttttttgcgccagttgaaggtgtatcgtttcatgcaaattcg
ttcatggagcttaatctctctcgtcctcttcttcgagcttgtgaagcactggggtactct
aagcctactccaattcaggcagcatgtatacctttagcacttacaggccgtgatatttgt
gggagtgccataactggttctgggaagacggctgcctttgcacttcccacgctagaaagg
ttattatttcgccccaaacgcattcccgctatccgggtccttattcttactccaacaaga
gagttggcagttcaggttcacagtatgatggagaaacttgctcaatttacagacattaaa
tgttgcttggttgttggagggctttcaacaaaggtgcaagaggtagctttgagagcaatg
ccggatattgttgtggccactcctggtcgcatgatagatcatttgcgtaattctatgtct
gtggatttggatgatcttgcagttttaattcttgatgaggcagatcgtcttctggagctt
ggatttagtgctgaaatacatgaactggttcgcctgtgtcccaaaaggagacagacaatg
ctattttcggctacaatgacagaagaagtcaatgaacttatcaaactttctctgactaaa
ccattgcgtctctcagctgatccatctgcgaaacgaccagtgacattgactgaggattct
ggtcactgttgtgttgcggttagcaagaacttagacgattgggagttggaggaatttgag
aatttcctctttatgatgattgctgatttttggactcggaacaactctgatcagcaatta
tcatttccgtttgaaaccatatggaaaacaatggctccccccaggattgctttcttttca
tgggaagtggctaaggagaaaattctgactttggataatttgatgaaaagaggtagaact
ttggtcaacagatgtgtggaatatgatctacagcttgatattaatggggtaatggcgggc
tctattcatagagaatttttggcttgggaagctgtttctgtaggccacttttctaaaata
aatttacattgtcttttcagtggaacaaagcaagctgcacataggttgaagattttgttt
ggattagctggtatgaaagcagctgaacttcatggaaatcttactcaagcccagcgtctt
gatgccttggaaattttcaggaagcaacaagtggattttctgattgcaacagatgtggca
gctcgtggacttgacataattggggttcaaacagttataaactatgcatgccctcgtgac
ctcacaagctatgttcatcgtgtgggtcgcacagccagagctggcagagaaggatatgcg
gttacgtttgtgacggatagtgatcgttctcttttaaaagctataactaaaagagttggt
tcaaagttgaagagaagaattgttgctgagcaatcaatcagcaagtggtcacagataatt
gatcaaatggaagagcaagtggcagcaattcttgaagaagagagggaggagcgagcccta
aggaaagctgaaatggaagcaacaaaggcagaaaacatgattgcacatcaagatgaaata
tattcccgccctaaaaaaacctggtttttgacagagaaggagaaaaagcttgcagcaaag
acagaaaaggcatctttagggaaaggaaaaagttctgggcatgaggtaataagtgctgaa
caagcagaggacctgaaaatgaaagaaaagagaaagcgggaacgtgagaaaaatctgcct
aggaaaaagcgtcgaaggttggaagcagtccgagagatgttggaagatgaaaatcaaatg
gaaaaaccagaaggtggtgataaaagtaagaaagaaaagaatggtatatcattggttgac
cttgcttatcgacgggcaaaggctttaaaagcaaaggccaaagctggcaagaaagaggag
gctaacaggaaatcaaaacgtcctgcccaaagaacacagtcaaggacggacgagatgaga
gagctcttccagagcgatatgagtgagaagaaacaaaagagaaatagtggtggcatgggg
aagaagaagtcaaagaactcatttaagagcaaatcacggtatggatcaaactataaattt
ttcccccgtcattctagtagtatttgttgtgttttcgtaatattatgttcttga

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