Carica papaya (papaya): 110822011
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Entry
110822011 CDS
T05151
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110822011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110822011
Enzymes [BR:
cpap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110822011
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110822011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110822011
NCBI-ProteinID:
XP_021907698
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MQKPKNIEFTKQPYIEDVGPRRIKSIEFSMLSDSEIVKSGEVQVWQGVYYDPKGKPIEGG
LLDPRMGPANKTCRCATCGGDYGDCPGHYGYLSLALPVYNVGYLATILDILKCICKSCSC
ILLEEKLCKDYLKKMRSPRMEPLRKSDLMKTIVKKCSAMASSKAIKCSRCGYINGMVKKA
ISMLGIIHDRSKINGGSLEEFRSAISHTKESKSSINPATYIINPVEVLSLFRRMSDEDCE
LLYLSDRPEKLMITSIAVPPIPVRPSVIIDGSQSNENDITERLKRIIQANASVRQELLEP
SAAFKSLAGWDMLQVEVAQYINSDVRGVPFAMQVAKPLSGFVQRLKGKQGRFRGNLSGKR
VEFTGRTVISPDPNLKITEVAIPIHMARILTYPECVSHHNIEKLRQCVRNGPSKYPGART
IGYPDGSKRVLMGDYRKRLADELKFGCIVHRHLEDGDIVLFNRQPSLHRMSIMCHRARIM
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAS
TQDFLTSSYLITRRDTFYDRAAFSLMCSYMGDGMDAIDLPTPTILKPVELWTGKQLFNVL
LRPNASLRVYLTLTLKEKNFKKNKIDDTMCPNDGFVYFRNSELITGQLGKATVGNGNKDG
LYSVLLRDYGAHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKELNRKKAETIMHEYN
ECDITIKRFNEGKLTLKPGCDAAQSLEANITEILNRIREKTGKDCMEGLHWRNSPLIMSQ
CGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPCKSKIPAAKGFVANSFYSGL
SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKGLEDLSVHYDYTVRNASGCIVQFVY
GDDGMDPASMEAKSGVPLNFDRLFLKIQATCPAGENDSYLSPGEISGKLEEELVKQSVAH
GGDCSEAFKRSLRDFFGVLGGRLKRTMELVEEYAAGGKCKDLEKVAHKVSGITNKLLEVF
VEICISRYHLKKIESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEII
NGAKKISTPIITAELEHDNDGKLALKVKNRIEKTNLGQVAERIEIVMTSSASKPASIVIV
LDMERIYKAGLCIDANSVKESILRTPRIKLKEKHIKVLDIKKLRVLPDADKSKFHFELHA
LKSSLPAVTVQGIRTIERVVVAEKKKEHEGAGQKWQLLVEGTGLQAVMGTDGIDGSNTKS
NHVMEVQQTLGIEAARNCIIDEIKDVMGNHGMTIDIRHMMLLADLMTFRGEVLGITRFGI
QKMDKSVLMLASFEKTADHLFNASVSGKVDRIEGVSECIIMGIPMQMGTGVLKVMQRVDP
LPKLSYEADPIIS
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaccaaagaatatagagttcaccaagcagccttatattgaggatgttggccct
cgaagaataaagagcatagaattctcaatgctttctgattcagagattgtcaaatcaggg
gaagtgcaagtatggcaaggggtatactatgatcccaaaggcaagcctattgaaggtggc
ttattggacccccgcatgggtcctgcaaataaaacttgcagatgcgccacctgcggtggg
gactatggagattgtccaggacattatggatacttgagtcttgctctccctgtttataat
gttggatatctggctactattttggacattttaaagtgcatttgtaagtcttgttcctgt
atacttctcgaggagaaattgtgcaaagactatttgaagaagatgagaagtccgagaatg
gaacctctgcggaagagtgatttgatgaaaacaattgtaaaaaagtgcagtgccatggca
agcagcaaagctataaagtgctcaagatgtggttatataaatggaatggttaagaaagca
atatctatgctgggtatcattcatgatcgttcaaaaatcaatggtgggagcttggaagaa
ttcagatctgcaatctctcacacaaaagaatctaagtcatccattaatcctgctacttat
attattaatcctgtggaagtgctttctctcttcagaaggatgagtgatgaggattgtgaa
ttgctttatctttctgacagacctgagaagctcatgataacaagcattgctgtaccacct
atacctgtccggccttctgttatcattgatggatcacagagcaatgaaaacgacataaca
gagaggttaaaacgaatcattcaagcaaatgcgagcgttcgtcaagaattgttagaacca
agtgcggcatttaaaagtttggctggatgggatatgcttcaagttgaggttgcacagtac
ataaatagtgatgttcgtggtgttccgtttgccatgcaagtggccaaacctttgagtggt
tttgtccagcgccttaaggggaagcagggacgctttcgtgggaatttatctggaaagcgt
gttgaatttaccggacggactgttatatctcctgaccctaatttgaaaattactgaggta
gcaattcctattcacatggcacggatattaacctatcccgagtgcgtttctcatcataat
attgagaagttgagacagtgtgttcgtaatggcccttctaaatatcctggtgcaaggacg
attggttatcctgatggttctaagagggttttaatgggtgattacagaaagcgccttgct
gatgagctcaaatttggttgcatagttcatcgccatttagaagatggagacattgttctt
tttaacagacaaccaagcttgcatcggatgtctatcatgtgccatagggcaagaataatg
ccttggaggacattaaggtttaatgaatctgtttgtaatccatataatgctgattttgat
ggggacgagatgaatatgcatgtcccacaaacggaagaagctcgaacagaggcacttttg
ctgatgggggtgcaaaataatttatgcactccaaaaaatggagaaattctggtggcatct
actcaagattttcttacatcatcctatcttataacaaggagggacacgttctatgaccgt
gcagctttttcacttatgtgttcttatatgggtgatggcatggatgccattgatctgcca
acacctacaattctgaagccagtagaactttggactggtaagcaactattcaacgtttta
ctacgaccaaatgcaagtttgagagtctatctcactctcacgttgaaggagaagaacttc
aaaaagaacaagatagatgatacaatgtgccccaatgatggatttgtttactttcggaat
agtgaactaataacaggacaattgggaaaggcaactgttggaaatggcaacaaggatgga
ttgtattctgttctcctcagggactatggtgcacatgctgctgcaacttgcatgaatcgg
cttgctaaattgagtgctcgatggattggaaatcatggcttctctattggaattgatgat
gttcaaccaggaaaagagttgaaccgcaagaaagcagaaacaattatgcatgaatataat
gaatgtgatataactataaaaaggttcaatgaaggcaagctaacacttaaacctggttgt
gatgctgctcaatcactggaagccaatataacagagatactgaatcggattcgagaaaag
actgggaaagactgtatggaaggactgcattggagaaacagtcccttgattatgtcccaa
tgtggctccaaaggatcccccattaatataagccagatggttgcatgtgttggtcagcaa
tcagttggtggtcggcgtgctcccgatggatttatagaccgaagccttcctcatttccct
tgcaaatcaaaaattcctgctgctaaaggctttgttgctaattcattctacagtggattg
agtgctactgagtttttcttccataccatgggtgggcgagaaggtcttgtggatacagcg
gtgaaaacagctgatactggctacatgtctcgcagactgatcaaaggcttggaggacctt
tctgttcattatgactacactgtacgcaatgcaagtggatgcatagttcaatttgtttat
ggagatgatggcatggacccggcatctatggaagcaaagagtggagttcctctgaatttt
gacaggttgttcttgaaaatacaggctacttgccctgctggggaaaatgatagctattta
tctccaggagaaatctctggaaagttagaagaagaattagtgaaacaaagtgtagctcat
ggaggagattgctctgaagccttcaagagatctctaagagacttttttggtgttcttggg
ggcagattaaagagaacaatggaattggttgaagaatatgctgctgggggaaaatgcaag
gatctagaaaaagttgcccacaaagtatctggcatcaccaataagctgctggaggttttt
gttgaaatttgcatatctcgttatcatttaaaaaaaattgaatctgggactgcaattggg
gcaataggagcacaaagtattggagaacctgggacgcaaatgacattaaaaaccttccat
tttgctggcgttgcaagcatgaatataacacaaggagttcctcgtatcaaggaaataata
aatggggccaaaaagattagcacacctatcattacagcagaactcgagcatgataatgat
ggtaagcttgcactgaaggttaaaaatcgcattgaaaagacaaatttaggccaggttgca
gagaggattgagattgtaatgacctcatcagcatcaaaaccagcatcgatagttattgtg
ctcgacatggaaagaatttataaagcaggtttgtgtatagatgctaacagcgtgaaagaa
tcaattctgcgaacaccaagaatcaaactgaaggaaaagcatattaaagttttggacatt
aaaaagttaagagttttaccagatgcggataaaagtaaatttcatttcgagctccatgca
ttaaaaagttcgcttccagctgttacagtgcagggtataagaactattgaacgtgttgtt
gttgctgaaaagaagaaggagcatgaaggagcaggacaaaagtggcaattgttggttgag
gggacaggcctccaagcagttatgggaactgatggaattgatggaagtaacacaaagagt
aaccatgtcatggaagtgcaacagacactagggattgaggcagcaagaaactgcataatt
gacgagataaaggatgtaatgggaaatcatggaatgaccatagatatacgccatatgatg
cttttggcagatctcatgactttcagaggtgaagttcttggaatcacaagatttggtatt
cagaaaatggacaaaagtgttttgatgcttgcttcgtttgagaagactgcagatcattta
ttcaatgcttcagtcagtgggaaggttgaccgaattgagggagtaagtgaatgcatcatt
atgggcatcccgatgcagatgggcacaggagtactcaaagttatgcaaagggttgatccg
cttccgaagttgagttatgaggcagatccaatcatttcttga
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integrated database retrieval system
