Clostridium pasteurianum BC1: Clopa_0006
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Entry
Clopa_0006 CDS
T02645
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpas03032
]
Clopa_0006
03400 DNA repair and recombination proteins [BR:
cpas03400
]
Clopa_0006
Enzymes [BR:
cpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Clopa_0006
DNA replication proteins [BR:
cpas03032
]
Prokaryotic type
DNA Topoisomerases
Clopa_0006
DNA repair and recombination proteins [BR:
cpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clopa_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AGK95122
UniProt:
R4JWB9
LinkDB
All DBs
Position
4845..6755
Genome browser
AA seq
636 aa
AA seq
DB search
MSQNNEIYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALGGFCKN
IDIVIHKDNSVSIVDDGRGMPVGIHHKMNKPTVEVIMTVLHAGGKFGGGGYKVSGGLHGV
GASVVNALSETCEVIVKRDGHIWRQLYHRGNVASPFEQIGDTEEHGTQTNFKPDSEIFEE
IEFSYDTLAQRLRELAFLNKGIKINFTDERQDKKETFHYEGGIKSFVSYLNRNKEAIFPE
PIYIEGYKGDYVVEMALQYNDGYAENLFSFANNIDTVEGGTHLSGFKTALTRVLNDYARK
FNFIKENDKNFSGEDIREGLTAVISIKLSDPQFEGQTKTKLGNSEVRGIVDSILGENVSA
FLEENPQIGKIIIDKALLAARARDAAKKARELTRRKSVLETTALPGKLADCSSKDPAECE
IYIVEGDSAGGSAKQGRDRKFQAILPLRGKIMNVEKQRIDKILNSEMIRAMITAFGAGIS
KDFDIEKIRYHRIIIMTDADVDGAHIRTLLLTFFYRYMRELVEQGHIYIAQPPLYKVSKG
KKEVYCYLEKDLDKVLEELGGKDNNTSIQRYKGLGEMNAEQLWETTMDPERRILLKATVE
DAMVADEIFTILMGDKVEPRREFIQQNAKNVINLDI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaataatgaaatttatgatgaaagtcaaattcaggttcttgaaggattagaa
gcggtaagaaagagacctggaatgtatataggtagcacttctctaaggggtcttcatcat
cttgtttatgaaatagttgataacagcatagatgaagctttaggtggtttttgtaaaaac
atagatattgtaattcataaggataactcagtatccatagttgatgatggaaggggtatg
cctgtaggaatacatcataaaatgaataagccaacagtggaagttataatgacagtgctt
catgctggaggaaaatttggcggtggtggttataaagtatcaggaggtctacatggtgtt
ggagcatcagttgttaatgctttatctgaaacctgcgaagttatagttaaaagagatggc
catatttggaggcagctttatcatagaggaaatgtagctagtccttttgaacaaataggt
gatacggaagaacatggtactcagactaattttaagccagacagtgaaatatttgaggaa
atagaatttagctatgatacattagctcaaaggctaagagaattagcatttttaaataag
ggaataaagattaattttacagatgaaagacaggacaaaaaagaaacattccattatgaa
ggtggaataaaatcatttgttagctatctaaatagaaataaagaagctatttttccagaa
ccaatttatattgagggatacaaaggtgattatgtagtggaaatggcacttcaatataat
gatggttatgcagaaaatttattttcttttgcaaataacattgatacagttgaaggtgga
actcatctttctggttttaaaacagcacttacaagagttttaaatgactatgcaaggaaa
tttaattttataaaggaaaatgataagaatttttctggagaagacattagagagggatta
acagcagttatatcaattaagctttcagatcctcagtttgaaggtcagacaaagacaaaa
cttggaaacagtgaagtaagaggaattgttgatagtattttaggtgaaaatgtaagtgcc
tttttagaggaaaacccacaaataggtaaaataataattgataaagctttgcttgcagca
agagccagagatgcagcaaaaaaggcaagagaacttacaagaagaaaatctgtacttgaa
actactgcccttccaggtaaactggcggattgttcttcaaaagatccagcagaatgcgaa
atttatatagttgagggtgattcagctggtggatcagctaaacagggtagagatagaaaa
tttcaagctatacttcctttaagaggaaagattatgaatgtagaaaagcagagaatagat
aagatattaaactctgaaatgataagagctatgataactgcttttggtgctggtataagc
aaggattttgatatagaaaaaataagatatcatagaattattattatgactgatgccgat
gtagatggtgcacatataaggacattgttattgacatttttctatagatatatgagagaa
cttgtggagcagggacatatatatatagctcagccaccattatataaggtttctaagggt
aaaaaggaagtatattgctatcttgaaaaagatttagataaggttctagaagagcttggt
ggtaaagataataatacaagtattcaaagatacaaaggtttaggtgaaatgaatgcagaa
caactttgggagactacaatggatcctgaaagaagaatacttttgaaagcaacagtagaa
gatgctatggttgcagatgagatatttacaattcttatgggagacaaagtagaaccacgt
agagaattcatacagcaaaatgcaaagaatgttataaatttagatatttaa
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