Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c23380
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Entry
CLPA_c23380 CDS
T03753
Symbol
rne
Name
(GenBank) ribonuclease E/G-like protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpat03019
]
CLPA_c23380 (rne)
03009 Ribosome biogenesis [BR:
cpat03009
]
CLPA_c23380 (rne)
Messenger RNA biogenesis [BR:
cpat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLPA_c23380 (rne)
Ribosome biogenesis [BR:
cpat03009
]
Prokaryotic type
rRNA processing factors
CLPA_c23380 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
DUF4473
Motif
Other DBs
NCBI-ProteinID:
AJA52396
UniProt:
A0A0H3J8U7
LinkDB
All DBs
Position
complement(2508532..2509980)
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AA seq
482 aa
AA seq
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MKNIFVERQDSLLRIAITEKDKLIGCRMEEEGTEVYPGQIYKGIVKNIVPAIKCAFIDIG
RGKNGYMYMDSKFNNVDIKKGQEILVEIIKESMGSKGPKLTNKITVPGRYAVIETLNNEI
SISKKIVDSEVQNYLRKNIQKPDNTGVMLRTNAEKVPIDEINDEIKRLYEIYQDIVRRSK
LSNKPEIIYNDDGALGKVLRDLLDEYTEKVIVNSEKDFHFIENYIKNKKDIKIKLERHNS
SIPIMEYYSIEKKILELRNNTVELHCGGSIVIDKTEAMYVIDVNSGKNVRQRNIKNTAEI
TNIEAAREIPLQIRLRNLSGIIVIDFIDLEDDEVKNKILNILENGFKEDKNKTIVYPFTE
LNIVQIARRRRGKSILDYIEQRCGNCNGNGKVLKLSYLSNLIRNNILRLDSESENFNKHI
YIEVNDEYRNIILNHTDKFIKSIAGEDKNIYVKFIKSFDTYKVFPLIYQSQIEEKNIYRI
YG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatatattcgttgaaaggcaagatagcttactgagaattgctataacggaaaaa
gataaacttataggatgtcgtatggaggaagaaggtacagaggtatatccaggtcaaatt
tataagggcatagttaaaaatattgtacctgctataaaatgtgcttttatagatattggt
cgtggcaaaaatggctatatgtatatggattccaaatttaataatgtagatataaaaaaa
ggtcaggaaattttagttgaaatcattaaagaaagtatgggatctaaaggtcctaaactc
actaataaaataactgtgcctggaaggtatgctgtaatcgaaactttaaataatgaaatt
tctatttcaaaaaaaatagtagatagtgaagtccagaattacctgagaaaaaatatacaa
aaacctgataatacaggcgtgatgcttaggactaatgcggaaaaagtacctatagatgaa
ataaatgatgaaattaaaagattgtatgaaatttatcaggatattgtgagaaggtcaaag
ttatctaataaacctgagatcatatataatgatgatggtgctttgggcaaagttttaagg
gatctgttagatgaatatacagaaaaagtaattgtaaatagtgaaaaagattttcatttt
atagaaaattatataaaaaataaaaaagatataaaaataaaattggaaagacataattct
tccattccaattatggaatactacagtattgaaaagaaaatattagagctcagaaataat
actgtagaacttcactgtggtggttccatagtaattgataagacagaagctatgtatgtt
attgatgtaaattcaggtaagaatgtcaggcagagaaatattaaaaatactgcagaaatt
acaaatatagaagcagcaagggagattcctctgcaaattagacttagaaatttgagtggc
ataatagttatagatttcatagatttagaggatgatgaggtgaaaaataagattttaaat
atcttagaaaatggctttaaagaggataaaaataaaaccatagtctatccttttacagag
ttaaatattgtgcaaatagccagaagaagaaggggaaagtccatattggactacattgaa
caaagatgcggcaattgtaacggcaatggaaaagtattaaaattatcctatttatctaat
ttaataaggaacaatatactcagattagatagtgaaagtgaaaatttcaataaacatatt
tatattgaagtaaatgatgaatatagaaatattatattaaatcatacagataagttcata
aagtctatagcaggtgaagataaaaatatttatgtaaagtttataaagtcttttgataca
tataaagtttttcctttaatttatcaaagtcaaatagaagaaaaaaatatatatagaata
tatggataa
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