Cupriavidus pauculus: EHF44_06640
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Entry
EHF44_06640 CDS
T05738
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpau
Cupriavidus pauculus
Pathway
cpau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHF44_06640 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpau03021
]
EHF44_06640 (rpoC)
03400 DNA repair and recombination proteins [BR:
cpau03400
]
EHF44_06640 (rpoC)
Enzymes [BR:
cpau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHF44_06640 (rpoC)
Transcription machinery [BR:
cpau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHF44_06640 (rpoC)
DNA repair and recombination proteins [BR:
cpau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHF44_06640 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
Apocytochr_F_C
DUF6744
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AZG13140
UniProt:
A0A3G8GYU4
LinkDB
All DBs
Position
1:1079098..1083339
Genome browser
AA seq
1413 aa
AA seq
DB search
MKALLDLFKQVQQEEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVLEPGMTPLKKSQIMSEDDYIAKCDEYGEGEFVAM
MGAEGIRELLRGIDIEKQIEQIRAELQATGSEAKIKKFAKRLKVLEAFQRSGIKPEWMIL
EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGKGEGMTFADISEVIRAYEN
KEVELASRVNVRITEYELVNKDADGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK
PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPQKEKII
SDAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQHEDVVDRTGATV
KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI
STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTTNGVAMKALVEGGEVIEA
LRDRILGRVTVGDVVNPETQETAIESGTLLDEDLVELIDNIGVDEVKVRTPLSCDTRYGL
CAKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA
TGTVRFTVTMRYVTNAKGELIVISRSGEALITDDHGRERERHKIPYGATLLVQDGQAIKA
GTQLATWDALTRPIVSEYSGTIKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTAATKG
LRPQVKLLDANNQEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAAVLAEVTGTVSFGKDTKGKQRLVITDLDGNAHEFLIAKEK
QVLVHDGQVVNKGEMIVEGPADPHDILRLKGIEELAHYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIQEVGDTKFIPGEQVERSELLDENDRVIAEGKRPAIHENLLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKTDDLRGLKENVIVGRLIPAGTGLAYHRARKAREA
AERERAQAISDEEQSLFIEPPVVQATEGDGDAV
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgatctctttaagcaggttcagcaggaagagcagttcgacgcgatc
aagatcggcctggcatcgccggagaagatccgttcgtggtcgtacggcgaagtgaagaag
cccgagacgatcaactaccgtacgttcaagccggaacgcgacggtctgttctgcgccaag
atcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtggaagtgacgctggccaaggtgcgccgcgag
cgcatgggccacatcgaactggccgccccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaggcattcgtggtgctggaaccgggcatgaccccgctcaagaagagccagatcatg
tccgaggacgactacatcgccaagtgcgacgagtacggcgaaggcgaattcgtggccatg
atgggtgccgagggcatccgtgaactgctgcgcggcatcgacatcgagaagcagatcgaa
cagatccgcgccgagctgcaggccaccggttccgaagccaagatcaagaagttcgccaag
cgcctgaaggtgctggaggcgttccagcgttcgggcatcaagcccgagtggatgatcctg
gaagtgctgccggtgctgccgcccgaactgcgtccgctggttccgctcgatggtggccgt
ttcgccacgtcggacctgaacgacctgtatcgccgcgtcatcaaccgtaacaaccgcctg
aagcgcctgctggaactgaaggcccccgagatcatcgtgcgcaacgaaaagcgcatgctg
caggaggccgtcgactcgctgctggacaacggccgtcgcggcaaggcgatgaccggcgcc
aacaagcgtccgctgaagtccctggccgaaatgatcaagggcaagggcggccgcttccgt
cagaacctgctgggcaagcgcgtggactactcgggccgttcggtcatcgtggtgggcccg
acgctgaagctgcaccagtgcggcctgccgaagctgatggcgctggagctgttcaagccg
ttcatcttccacaagctggaaacgatgggcatcgccaccacgatcaaggcggcgaagaag
gaagtggaaagccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcac
ccggtgatgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggcgttcgagccg
gtgctgatcgaaggcaaggccatccagctgcacccgctggtctgcgcggcgttcaacgcc
gacttcgacggtgaccagatggccgttcacgtgccgctgtcgctggaagcccagatggaa
gcccgcacgctgatgctggcgtccaacaacgtgctgttcccggccaacggcgatccgtcg
atcgtgccgtcgcaggacgtggtgctgggtctgtactacacgacccgcgacaagatcaac
ggcaagggcgagggcatgacgttcgctgacatcagcgaagtcatccgcgcctacgagaac
aaggaagtcgaactcgcgtcgcgcgtgaacgtgcggatcaccgagtacgaactcgtgaac
aaggacgccgacggcgatgcccgtttcgcgcccaagatcacgctgcaggccaccacggtc
ggccgcgcgatcctgtccgagatcctgccgaagggcctgccgttctcggtgctgaacaag
ccgctgaagaagaaggaaatctcgcgcctgatcaacacggcattccgcaagtgcggcctg
cgcgagaccgtgatctttgccgacaagctgctgcagtcgggcttccgcctggccacgcgc
gccggtatctcgatcgccatcgacgacatgctggtgccgccgcagaaggagaagatcatc
tccgacgcggctgccaaggtgaaggaatacgacaagcagtacatgtcgggtctggtgacg
gaccaggagcgctacaacaacgtcgtggacatctggggcgccgcgggcgaccaggtgggc
aaggcgatgatggagcaactccagcacgaggacgtggtcgatcgcaccggtgcgacggtc
aagcaggaatcgttcaactcgatctacatgatggcggactcgggtgcgcgcggtagcgcg
gcccagattcgtcagcttgcggggatgcgcggcctgatggccaagccggacggctcgatc
atcgaaacgccgattacggcgaacttccgtgaaggcctgaacgttctgcagtacttcatc
tcgacccacggtgcgcgtaagggcctggccgatacggcactgaagaccgcgaactcgggt
tacctgacccgtcgtctggtcgacgtgacgcaggatctggtcgtggtggaagacgattgc
ggcacgaccaacggcgtggccatgaaggcgctggtcgagggcggtgaagtgatcgaagcc
ctgcgcgaccgtatcctgggccgtgtgaccgtgggcgacgtggtgaaccctgagacccag
gaaaccgccatcgaaagcggcacgctgctggacgaagacctggtcgagctgatcgacaac
atcggcgtggacgaggtcaaggtccgcacgccgctgtcgtgcgacacgcgctacggcctg
tgcgccaagtgctacggccgcgacctgggccgcggcgtgctggtgaactcgggcgaagcg
gtgggtgtgatcgccgcgcagtcgatcggcgagccgggtacccagctgaccatgcgtacg
ttccacatcggtggtgcggcatcgcgtgcggcagtggcgtcgagcgtggaagccaaggcc
accggtacggtgcgcttcacggtgaccatgcgctacgtgaccaacgccaagggcgaactg
atcgtgatctcgcgttccggcgaggcactgatcacggacgaccacggccgcgagcgtgag
cgccacaagatcccgtacggtgccacgctgctggtgcaggacggccaggccatcaaggct
ggcacgcaactggccacgtgggacgcgctgacgcgcccgatcgtttccgagtactcgggc
acgatcaagttcgagaacgtggaagaaggcgtgaccgtcgccaagcagatggacgaggtc
accggcctgtcgaccctcgtggtgatcgacgccaagcgccgcacggctgccaccaagggc
ctgcgcccgcaggtgaagctgctcgacgcgaacaaccaggaagtcaagatcccgggcacg
gaccactccgtgaccatcggcttccaggtgggcgcgctgattaccgtgaaggacggccag
caggtgcacgtcggtgaagtcctggcgcgtatcccgaccgaatcgcagaagacccgcgac
attaccgggggtctgccgcgtgtggccgagctgttcgaagcccgttcgccgaaggacgcc
gccgtgctggcggaggtcaccggtacggtgtcgttcggcaaggacacgaagggcaagcag
cgcctggtcatcacggacctggacggcaacgcccacgagttcctgatcgcgaaggaaaag
caggtgctggtgcacgatggccaggtggtgaacaagggcgaaatgatcgtggaaggtccg
gcggacccgcacgacatcctgcgcctgaagggcatcgaggaactggcgcactacatcgtg
gacgaggtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgattgttcgtcagatgctgcgccgcgtgcagatccaggaagtgggcgacaccaagttc
atcccgggtgaacaggtggagcgttcggaactgctcgacgagaacgatcgcgtgatcgcc
gaaggcaagcgtccggccatccacgagaacctgctgctgggtattaccaaggcgtcgctg
tcgaccgacagcttcatctcggcggcatcgttccaggaaaccacgcgcgtgctgaccgaa
gccgcgatcatgggcaagaccgacgacctgcgtggtctgaaggaaaacgtgatcgtgggc
cgcctgatcccggctggtaccggcctggcctaccaccgtgcccgcaaggcacgcgaggcc
gccgagcgcgaacgcgcccaggcgatcagcgacgaagagcagtcgctcttcatcgagccg
ccggtggtgcaagccaccgaaggcgacggcgacgcagtctga
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