Chlorobaculum parvum: Cpar_1091
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Entry
Cpar_1091 CDS
T00725
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpc
Chlorobaculum parvum
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_1091
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpar_1091
Archaeal homologous recombinant proteins
Cpar_1091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
ABC_ATPase
cobW
nSTAND3
NTPase_1
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACF11499
UniProt:
B3QNJ6
LinkDB
All DBs
Position
complement(1204404..1208084)
Genome browser
AA seq
1226 aa
AA seq
DB search
MKILTLRFANLNSLQGEWQIDFTRPEYVADGVFAITGPTGSGKSTILDAICLALYGETPR
LGKITVSSNEIMSRHAGECFAEVTFAAASGTFRCTWSQHRSRKKPGGALQAQKHEIADAA
TGAIIQSRVQETRLEVEARTGMDFDRFTRSMLLAQGDFAKFLQADADQRAPVLEQITGTE
IYSLISMKVHERKRAELERLQRLEIEVGGIRLLGAEELAALEAERSEALEQEAKMSASLE
SDSAALRWLEEIARLEEAVAANSREAEALNTEREAFAADARRLERAQTAALIEVAYAEVR
LMREELQRNAGELAGKEVQHPESERAVREAGEAFEAAERGVASAQQALQDGRPLIAHARQ
LDEQIAGKSGEVERLQHDAETLEERQAQLRSERAEVSTALGSIRIALQNLQAWQNQHQTD
ASLAGALSGIRHALDELRPAAEREVAAASGITDTQHNLEVLQGELVLAEADARASQSAFD
DARMALGKMKESFALQLDGASLSSLRGELDRLRERHRQLEAIVALYAEGKQFVPKIDKIW
VEIQQTERRQEELSLKFDHARQLLEHAERDLVSQEELARLADRVRSLEEERERLVDGQPC
PLCGSPSHPWADGASELLERSQEALHEARRIVQERSKALKELELALAKTGTEIDERRKSL
QELAELRESSGRKCLALLKEVGVNVPAREAEPVVEEALQQTASQRDALAGRIEQLETLEQ
RIRDHEADVAQLNETAHTAQRRLEQVTERQRSLLLDLARLKKELGLAQQNVAERQRSFSR
LVEPFGVREIDDPAEIVSALALRSTEWASNEKRIRTLEQEELAGQSRLKNLDDQLATISA
DFLEKDRDVKAAVTSLEALKSKRAGVLQGHDPDVEEERLERTLQAARTKLDELTEKRNAA
REALSVLETAIAGLHQALQERRLVLERREEAFTLELKQKGFIGEAVFLEARLPIGERQKL
EQKADSLNKRAHELEARRKERQTKLHEVRERQLTSESNEKLSERIARRQEQLREVRGRIG
AIANQLRENEQAAGEHRIKLHAVEAQKSEYRRWELLHDLIGSVDGKKFRNFAQGITFELM
ISHANRQLRQMTDRYQLLHDPNNPLELSVIDQWQAGEVRSTRNLSGGESFIVSLALALGL
SQMSSRNVRVDSLFLDEGFGTLDEEALETALDTLAGLQQSGKLIGVISHVAALRERISTH
IRVAPKTGGRSSIEGPGVAAMPSIQG
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgaccttgcgttttgccaacctcaactcgctgcaaggggagtggcagatc
gatttcacccgcccggagtacgtggccgacggtgtgttcgccataaccggccccaccggt
tcgggcaagagcaccatcctcgacgccatctgcctggcgctctacggcgagacgccgcgt
cttggcaagatcaccgttagcagcaacgaaatcatgtcgcgccacgcgggcgagtgcttc
gccgaggtgaccttcgccgccgcctccggcaccttccgctgcacctggagccagcaccgg
tcgcgcaaaaagccgggcggcgcgttgcaggcgcagaagcacgaaatcgccgatgccgcg
accggagcgatcatccagtcgagggtgcaggagacgcggctggaggtggaggcgcgaacc
ggcatggacttcgaccgcttcacccgttcgatgctgctcgcgcagggggacttcgcaaag
tttctgcaagctgatgccgaccagcgtgccccagtgctcgaacagatcaccggcaccgag
atttactcgttaatttcgatgaaggtacacgagcgcaagcgtgccgaactggaacgcctt
cagcggctggaaatcgaggtgggcggcatccgcctgctgggggcggaggaacttgctgcg
cttgaggcggagcggagtgaagctctggagcaggaagcgaaaatgtcggcaagccttgaa
tcggattccgctgccctgcgctggctcgaagagatcgcgcggctcgaagaggcggttgcc
gccaacagccgggaggccgaggcactcaataccgaacgcgaagcgttcgctgctgatgct
cgccgccttgaacgtgcgcaaactgccgcgctaatcgaggtcgcgtatgccgaggtgcgg
cttatgcgcgaggagttgcaacgcaatgcaggagaactggccggaaaagaggtgcaacat
cctgaatcggaacgcgctgtccgtgaggcaggggaggcgttcgaagctgctgaacgcggg
gttgcatcggcgcagcaagccttgcaggatggcaggccgctgatcgctcacgcccgtcag
ctcgacgagcagattgcgggcaagtcgggcgaagtcgagcggctgcaacacgatgccgaa
acgcttgaagagcgtcaggcgcagctccggagcgaacgtgccgaagtttcgacagccctc
ggatccatccgtatcgccttgcaaaatttgcaggcatggcaaaatcaacatcagactgat
gcatcactcgccggagcgctgtccggtatccgtcacgcgctcgacgagcttcgtcccgcc
gccgaacgcgaggtggctgccgcttcgggaatcactgatacccagcacaaccttgaagtg
ttgcagggcgaattggtgcttgccgaagcggacgctcgtgcttctcaaagcgcattcgat
gatgctcgcatggcgctcggaaaaatgaaggagtcgttcgccttgcaactggatggggca
agcctttcgtcgcttcgtggggagcttgatcgtctccgcgaacgacatcgccagcttgaa
gcgattgtcgcgctgtatgccgagggaaagcagtttgtaccaaagatcgacaagatctgg
gtggaaatccagcagacagagcgcaggcaggaggaactttcgcttaaattcgatcatgcc
cggcaacttctcgaacatgccgagcgagacctggtttcgcaggaagaacttgcacgactt
gccgaccgggtacgcagtcttgaagaggagcgcgagcggcttgtcgatggccagccatgc
ccgctttgcggctcgcccagtcatccctgggctgacggtgcgtcggagttgcttgagcgc
agccaggaggcgttgcatgaagccaggcgcatcgttcaggaacgctcgaaagcgctcaaa
gagctggaacttgctttggctaaaaccggcacggagatcgatgagcgccgcaagagcttg
caagaacttgccgaattgcgagaatcatccggccgaaagtgcctcgccctgctcaaagag
gtcggagttaatgtgcctgcacgagaagccgagccggtagtggaggaagctttgcagcaa
accgcgtcgcagcgggatgcgcttgccggacgcattgaacaactcgaaacgctcgaacag
cggattagagaccatgaggccgatgtggcccaactgaacgagacggcacatactgctcag
cgccgtcttgaacaagtgaccgaacgtcagcggtcactgctactcgatcttgcacggctg
aaaaaggaacttggtctggcgcagcagaacgttgccgagcggcagcgaagcttctccagg
ctggtggagccattcggagttcgagagatcgatgatccggcagagatcgtgtctgcgctc
gcactgcgaagcacagagtgggcgagcaacgaaaaacgcatccgaaccctcgaacaggag
gagcttgctggccagtcgcgcctgaaaaatctcgatgatcaacttgccacgattagtgca
gattttttagagaaagatcgggatgtcaaggcggcagtcaccagccttgaagccttgaag
tccaaacgtgcaggcgtgctccagggccatgatcccgatgttgaggaagaacgtctcgaa
cgcacgttgcaagctgctcgcaccaagcttgatgagctcaccgaaaaacgcaacgccgcg
cgtgaagctctgtccgtgctcgaaacagcgattgccgggctgcaccaggctctgcaagaa
cggcggttagtgcttgagcgtagggaagaggcttttacgcttgaactcaagcaaaaggga
tttatcggcgaagcggtttttcttgaggctcgtttgcccatcggagaacggcagaagctc
gaacagaaagccgattcgctcaacaagcgtgcgcatgagctcgaagcgcgacgcaaagag
cggcagacgaagcttcatgaagtgcgcgaacgccaactcacatcggagagcaacgagaag
ctttcggagcgcatcgcccggcggcaggagcagttacgcgaagtcaggggacggatcggc
gctatcgcaaatcagcttcgggaaaacgaacaggctgccggtgagcatcgcatcaaattg
catgcagtcgaggcgcagaagtcagagtaccgccgctgggagttgctgcacgatttgatc
ggttcagtggacggcaagaagttccgcaacttcgcgcagggcatcactttcgagctgatg
atctcgcatgccaaccgccagctccgacagatgaccgaccgttaccagctcctgcacgat
ccaaacaatccgctcgaactcagcgtcatcgatcagtggcaggcgggtgaagtacgctcg
acgcgcaacctctccggcggagagagcttcatcgtcagcctcgcgctcgccctcggcttg
tcgcagatgtcaagccgcaacgttcgggtcgattcgctctttctggatgaagggttcggc
acgctggacgaggaggcgcttgaaacggcgctcgacacccttgccgggttgcagcagtcc
ggcaaactgattggcgtcatctctcatgtggctgcgctcagggaacgcatctcgacccac
atcagagtcgcccctaaaaccggaggtcgtagttcaatcgaaggccccggagtcgccgct
atgccgtcgattcaggggtaa
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