Chlamydia pecorum P787: CPE3_0948
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Entry
CPE3_0948 CDS
T02853
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cpec
Chlamydia pecorum P787
Pathway
cpec02020
Two-component system
cpec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CPE3_0948 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CPE3_0948 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpec03021
]
CPE3_0948 (rpoN)
Transcription machinery [BR:
cpec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPE3_0948 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_11
HTH_23
YolD
ANAPC4
Motif
Other DBs
NCBI-ProteinID:
AGW40264
LinkDB
All DBs
Position
1082179..1083453
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AA seq
424 aa
AA seq
DB search
MFQQRQQTSVRPLPLLRMQQGLHMLQAPIAELSSYVIQELIDNPFFDLSSLEEEERSQYS
SSFADLESSPSQPESLISHILSQIHQAFHTQEDIRIAYHIAGNLSDEGLFLEPVDLLAEQ
LHVSENRIYTVWGNMQKFHPSGICSPSLKSYWLMRLQDTPHQKAYQIISQCYSALTECNF
PVIMKRFGITFKELREILKQALGSIPWCPAAGYHASSHLPSPPPPDIYVMYSQGWEIRVN
SRGLPAIKLNTQAIQLYDDLPKEDKKLLTQQILSAKWLIKNLMKREHTLFSLVQKLLPYQ
EEFLLGRVSSPRPLTIKKIAEELECHETTIFRAVQNKSLASPIGILPLKLLFPRAVVTEE
SPLSKETILHWIRQWIATETSPLSDQSLSEKIAEKGIPCARRTVAKYRSQLKIPPAHKRK
ILQM
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacaaaggcaacaaacatctgtacgtcccctccccttactgcggatgcagcag
gggttacatatgctacaagcaccgattgccgaactctcttcgtatgtaattcaagaactt
atcgataatcctttctttgatctctcttctttggaagaagaagagagatcacaatacagc
tcttcctttgcagatctagaatcctcgccttcacaacctgaatccctgatctcccatatt
ctctctcaaattcatcaagcattccatacccaagaagatatccgcattgcctaccacatc
gcggggaacctttctgacgaagggctatttttagaacctgtagatcttcttgctgagcaa
cttcacgtctccgaaaatcgcatctatactgtttggggaaacatgcaaaaattccacccc
tcaggaatctgctccccctcattaaaaagctactggctcatgagattacaggatacccct
caccaaaaagcctaccaaatcatcagccaatgttattccgcactaacggaatgcaatttt
cccgttattatgaaacggtttggcataacttttaaagagctacgagaaatactaaaacaa
gccttggggagtatcccttggtgccctgctgcaggatatcacgcatcctctcatctcccc
tctcctcctcctcctgatatatatgtcatgtattctcaaggctgggaaatcagagttaac
tccagaggtcttcctgccattaagctcaacacgcaggctattcaactgtacgacgacctc
cctaaagaagacaaaaagctccttacccagcaaatcttgtctgcaaaatggctcatcaaa
aatcttatgaaacgcgagcacacattattttcccttgtacaaaaacttttgccttaccaa
gaggagtttctcctaggaagagtctcttctccacgcccacttacgattaaaaagatagca
gaggagcttgaatgtcatgaaacaacaattttccgggctgtgcaaaataagagcctagct
tcccctattgggatccttcccttaaagctcctctttccacgtgctgtggtgaccgaagag
tctcccctatccaaagaaactattttgcactggatccgccaatggatcgcaacagaaacc
tctcctctttccgatcagagccttagtgaaaaaattgcagaaaaaggaatcccctgtgcg
agaagaaccgtggcgaaataccgctctcaattgaaaatccctcctgcgcataaacgcaaa
atcctgcagatgtaa
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